PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379415.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARR-B
Protein Properties Length: 210aa    MW: 24208.8 Da    PI: 9.7249
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like54.23.2e-17140190455
         G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     + W  +L + F++ave + G  +A Pk+i e mkv+gLt+++++SHLQk+R 
  XP_026379415.1 140 VMWKGTLQNLFLQAVEYM-GVTHAEPKKIQEYMKVPGLTRKNIASHLQKHRF 190
                     57****************.999****************************96 PP
2Myb_DNA-binding24.28.1e-08145189748
                      HHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   7 eEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       ++ l+++av+ +G     +k+I ++m   g+t+k++ s++qk++
   XP_026379415.1 145 TLQNLFLQAVEYMGVThaEPKKIQEYMKvPGLTRKNIASHLQKHR 189
                      57899**************************************97 PP
3Response_reg27.21.9e-1015553107
                     CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS
    Response_reg  53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107
                     mp+m+G++ll+ i +e  +lp+ ++++ +e e++++ +  Ga  +l+Kp   +++
  XP_026379415.1   1 MPKMNGFQLLQCILQEFVNLPVFLMSGDNEREMVTRGILNGAAFYLTKPLTYSDI 55 
                     9************9999********************************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MPKMNGFQLL QCILQEFVNL PVFLMSGDNE REMVTRGILN GAAFYLTKPL TYSDIEKLWQ  60
HVFTRKMETK IMKQTEIRGQ DSLQQEKQKI SSIDGSSKAN DQETLHKTYE LTNRKEPLDD  120
PLSDDETSRL PQIPKNGKGV MWKGTLQNLF LQAVEYMGVT HAEPKKIQEY MKVPGLTRKN  180
IASHLQKHRF KDRVEKRTDP STSAPLNVQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.15e-31ARR-B family protein