PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379491.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 341aa MW: 38859.5 Da PI: 6.6091

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.9e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++q G+g+W++++ g+ R+ k+c++rw +yl XP_026379491.1 14 KGPWTPEEDIILVSYIQQNGPGNWRLVPTNTGLMRCSKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.9	7.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+e ++++ +lG++ W++Ia++++ Rt++++k++w+++l XP_026379491.1 67 RGNFTPHEEEMIIHLQSLLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ QNGPGNWRLV PTNTGLMRCS KSCRLRWTNY 60 LRPGIKRGNF TPHEEEMIIH LQSLLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKINKFQ 120 STLNPPSPPL HQVIASNSTV FAHRHHDLCY TDKSDDQSTT NLSLLLDHHI MINHGTTTTT 180 SSGGATYASS TENISRLLEG WMRSSPKLNS NKKYILPNTS PPIESNKEEE TGNKLHHHEQ 240 ESCDIISSSH EDFDSLLSFE NMNCNIPWEK LSASSNDIDL DQKMRSFPEI NTIQNLVENG 300 QQQQQQPFRL FEKWLLDEAA INQGIIELSS LNDDHSFGHD M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	1e-88	MYB family protein