PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379520.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 348aa    MW: 39483.4 Da    PI: 8.3865
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4171.7e-127234719374
            GRAS  19 laqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeerv 112
                     la++++ +l + ++p gd+mqR+a+yfteAL +rl+  + + +  + +p ++ + ns e l++++++++++P++kf+h+taNqaI ea+e eerv
  XP_026379520.1   2 LAKRYIHHLGQVVTPLGDSMQRVASYFTEALTTRLSAvTLTPTTCTPKPYTAFPPNSFEILKIYQTLYQACPYIKFAHFTANQAIFEAFECEERV 96 
                     68999*******************************96444454455555555678*************************************** PP

            GRAS 113 HiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlv 207
                     HiiD+di qG QWpa++qaLa+R++g+p lRiTgvgs      e ++etg+ L+++A++l+v+fef++ v +rledl+ ++L+ + gEalaVn+v
  XP_026379520.1  97 HIIDLDILQGYQWPAFIQALAARKGGAPFLRITGVGS----PPEFVKETGRCLTELAHSLHVRFEFHP-VGERLEDLKSHMLQRRVGEALAVNSV 186
                     *************************************....89*************************.7************************* PP

            GRAS 208 lqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvaceg 302
                      +lhr+   s     +  ++L ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p++s er+kvE+ ++++ei+n+vaceg
  XP_026379520.1 187 NRLHRVS--SN----YLGNLLGMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLHATFPANSPERVKVEHYIFAPEIRNIVACEG 275
                     ******8..44....4556**************************************************************************** PP

            GRAS 303 aerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +er+erhe+lekWr+ ++  GFk+v+ls++a +q klll  ++ dgyr+ e++g+l+lgW+dr+++++SaWr
  XP_026379520.1 276 SERVERHERLEKWRKLMKGKGFKEVALSQNALTQSKLLLGLYSCDGYRLTEDRGCLLLGWQDRAILAASAWR 347
                     ***********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MLAKRYIHHL GQVVTPLGDS MQRVASYFTE ALTTRLSAVT LTPTTCTPKP YTAFPPNSFE  60
ILKIYQTLYQ ACPYIKFAHF TANQAIFEAF ECEERVHIID LDILQGYQWP AFIQALAARK  120
GGAPFLRITG VGSPPEFVKE TGRCLTELAH SLHVRFEFHP VGERLEDLKS HMLQRRVGEA  180
LAVNSVNRLH RVSSNYLGNL LGMIRDQAPN IVTLVEQEAS HNGPYFLGRF LEALHYYSAI  240
FDSLHATFPA NSPERVKVEH YIFAPEIRNI VACEGSERVE RHERLEKWRK LMKGKGFKEV  300
ALSQNALTQS KLLLGLYSCD GYRLTEDRGC LLLGWQDRAI LAASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.15e-95GRAS family protein