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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_026379520.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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| Family | GRAS | ||||||||
| Protein Properties | Length: 348aa MW: 39483.4 Da PI: 8.3865 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 417 | 1.7e-127 | 2 | 347 | 19 | 374 |
GRAS 19 laqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeerv 112
la++++ +l + ++p gd+mqR+a+yfteAL +rl+ + + + + +p ++ + ns e l++++++++++P++kf+h+taNqaI ea+e eerv
XP_026379520.1 2 LAKRYIHHLGQVVTPLGDSMQRVASYFTEALTTRLSAvTLTPTTCTPKPYTAFPPNSFEILKIYQTLYQACPYIKFAHFTANQAIFEAFECEERV 96
68999*******************************96444454455555555678*************************************** PP
GRAS 113 HiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlv 207
HiiD+di qG QWpa++qaLa+R++g+p lRiTgvgs e ++etg+ L+++A++l+v+fef++ v +rledl+ ++L+ + gEalaVn+v
XP_026379520.1 97 HIIDLDILQGYQWPAFIQALAARKGGAPFLRITGVGS----PPEFVKETGRCLTELAHSLHVRFEFHP-VGERLEDLKSHMLQRRVGEALAVNSV 186
*************************************....89*************************.7************************* PP
GRAS 208 lqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvaceg 302
+lhr+ s + ++L ++++ P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p++s er+kvE+ ++++ei+n+vaceg
XP_026379520.1 187 NRLHRVS--SN----YLGNLLGMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLHATFPANSPERVKVEHYIFAPEIRNIVACEG 275
******8..44....4556**************************************************************************** PP
GRAS 303 aerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+er+erhe+lekWr+ ++ GFk+v+ls++a +q klll ++ dgyr+ e++g+l+lgW+dr+++++SaWr
XP_026379520.1 276 SERVERHERLEKWRKLMKGKGFKEVALSQNALTQSKLLLGLYSCDGYRLTEDRGCLLLGWQDRAILAASAWR 347
***********************************************************************8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 348 aa Download sequence |
MLAKRYIHHL GQVVTPLGDS MQRVASYFTE ALTTRLSAVT LTPTTCTPKP YTAFPPNSFE 60 ILKIYQTLYQ ACPYIKFAHF TANQAIFEAF ECEERVHIID LDILQGYQWP AFIQALAARK 120 GGAPFLRITG VGSPPEFVKE TGRCLTELAH SLHVRFEFHP VGERLEDLKS HMLQRRVGEA 180 LAVNSVNRLH RVSSNYLGNL LGMIRDQAPN IVTLVEQEAS HNGPYFLGRF LEALHYYSAI 240 FDSLHATFPA NSPERVKVEH YIFAPEIRNI VACEGSERVE RHERLEKWRK LMKGKGFKEV 300 ALSQNALTQS KLLLGLYSCD GYRLTEDRGC LLLGWQDRAI LAASAWRC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G66350.1 | 5e-95 | GRAS family protein | ||||




