PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379556.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 314aa    MW: 35874.2 Da    PI: 8.2019
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.31e-16124222297
                     EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     +k+l +sdv+++gr+vlpkk ae++  +++ + ++ l++ d +g ++W++k+++  +++s++y+l+ ++ eFv+ ++L+ gD ++++ d+ ++++
  XP_026379556.1 124 QKELRHSDVSSLGRIVLPKKAAETYlpKLNIKDGIFLSMDDINGlQVWNFKYRFwpNNNSRMYILE-NTGEFVRFHDLRIGDYMMLYIDD-QSQK 216
                     79999**********************777779999*****9999*******99788888888888.********************776.4444 PP

                     .EEEEE CS
              B3  92 lvvkvf 97 
                     + ++ +
  XP_026379556.1 217 FIIRGR 222
                     466655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MAGVSSRKKF VTMVGDNKKR EEEADDHELN RSRTSHRLLT AEFRIATSFE GTNRKKRNAR  60
QRRITVNTNF CFGTAGAGGP SSSSSSGSSP ILQTNSEAQT IPSLTRSIQP SSEVEVRRLR  120
FLLQKELRHS DVSSLGRIVL PKKAAETYLP KLNIKDGIFL SMDDINGLQV WNFKYRFWPN  180
NNSRMYILEN TGEFVRFHDL RIGDYMMLYI DDQSQKFIIR GRKASDHDIY SDYRRNGFDS  240
SNFQFSLDSE VNKSNYFYVN CPTIDEMGMS YFFNDTIPDH FPLEVPGATL PNFQSLEPVT  300
GFGSVDNLSL DDFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.12e-49B3 family protein