PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379761.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 422aa    MW: 45769.6 Da    PI: 9.655
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.32e-09210238129
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                      r+ WT+eEd  l+ avk++G+++W+ I +
   XP_026379761.1 210 RKHWTAEEDNELIAAVKKFGKRNWANILK 238
                      678**********************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MASSDNNTQR GRKGFISEED IALVLTRYSA PTILTLLKEV AQYPDVKIDW NVLVKKTTTT  60
GVTNAVEYQK LLRHLAYCDK LPLTIEEILE EQPLEDDDSD LEYELEALGP VNGEASLEAA  120
ACVKVLLASG LQDDAGGVSA TVEAPLTITI PTWQDYKSPL DDPLLCSLKG INITVPVSVQ  180
KVTTTAVRTA EEGLDATASN AGGHPGKGKR KHWTAEEDNE LIAAVKKFGK RNWANILKAD  240
IFKGDTTASQ PSQRWGIIRK RLKLETGGGE LIAQQRATNR AVSSALNMPI INSLLAAYAA  300
SVVPNLMVQE AAVAAGARIA THLTAKSLRK AARSKKSSMP GVHYICTGLS SASPATYSTS  360
VPSVSLPPPT PAGKVRFLLS VFSPLHLLHV GRLLQARRQI ELRVPELGTR WRKKMFQTHI  420
RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.11e-47MYB_related family protein