PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379762.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 514aa MW: 54759.1 Da PI: 9.3128

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.1	2.2e-09	232	277	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 r WT eEd l+ avk+lG ++W+ I + Rt+ q+ rw XP_026379762.1 232 RTTWTLEEDNELIAAVKKLGERNWANILKADIfkGDRTASQLSQRW 277 678************************9854444577777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MASSDNKTQK RWKGLIRKED IASDLTRYST PTKLALLKEV AQLPDVIIDR NVLVKKTTTG 60 IINAREYPML WRHLAYCDKL PEAVDEKLEE QRLDDEDSDL EYELLEAFPP ATDEASLEVA 120 SCVKVLLASG LSDDAGSPIT VEAPFTTNMP TWQDFKSPLD NPQPCSLKGI NIAVPVSVQK 180 QSSAAVTTAK GLDGTVATTA KGLDGTVATT AKGLDGTVAN AGDVQPAKRR KRTTWTLEED 240 NELIAAVKKL GERNWANILK ADIFKGDRTA SQLSQRWGII RKRLSNRQNE LTEQRLATNQ 300 AVTQALSMPM NNNLSAACTI SPANLVASAA TVNSQQIPLH TPKGTSGVIA KPRSITKRTA 360 PVVPNPVIQA AVIAAGTRTA TPPSAISVLK SCTIQGVTPP LAPNHSGARP NVHYICTGLS 420 SASPTTYSTA VPSVSLPPPT PAVKCKVPSV SVLASASTSY GAVAAGRKTN RVTSAGVGNT 480 LEEEKAQNSS KEVVKNSSNE EEVNNSLRKD RSSL

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MASSDNKTQK RWKGLIRKED IASDLTRYST PTKLALLKEV AQLPDVIIDR NVLVKKTTTG  60
IINAREYPML WRHLAYCDKL PEAVDEKLEE QRLDDEDSDL EYELLEAFPP ATDEASLEVA  120
SCVKVLLASG LSDDAGSPIT VEAPFTTNMP TWQDFKSPLD NPQPCSLKGI NIAVPVSVQK  180
QSSAAVTTAK GLDGTVATTA KGLDGTVATT AKGLDGTVAN AGDVQPAKRR KRTTWTLEED  240
NELIAAVKKL GERNWANILK ADIFKGDRTA SQLSQRWGII RKRLSNRQNE LTEQRLATNQ  300
AVTQALSMPM NNNLSAACTI SPANLVASAA TVNSQQIPLH TPKGTSGVIA KPRSITKRTA  360
PVVPNPVIQA AVIAAGTRTA TPPSAISVLK SCTIQGVTPP LAPNHSGARP NVHYICTGLS  420
SASPTTYSTA VPSVSLPPPT PAVKCKVPSV SVLASASTSY GAVAAGRKTN RVTSAGVGNT  480
LEEEKAQNSS KEVVKNSSNE EEVNNSLRKD RSSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	8e-54	MYB_related family protein