PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380021.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 643aa    MW: 71924.3 Da    PI: 7.0492
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS424.11.1e-1292646274373
            GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                      L++c+e +ss+++++++++L+rl elasp+g++++R++ayfteALa r ar ++++++   p++ + + ++e+++al+l+++vsPi+kf h+t 
  XP_026380021.1 264 FLVACVESISSKNMSAITHYLSRLGELASPEGNTIRRVTAYFTEALALRAARLWPHIFHVSVPRDID-RAEDETASALRLLNHVSPIPKFLHFTS 357
                     599*******************************************************999888886.7899999******************** PP

            GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                     N++ l+++eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTg+g+    sk+ l+etg+rLa fA++l++pfef++ v++rled++l++
  XP_026380021.1 358 NEMYLRSFEGKDRVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGIGE----SKQDLQETGDRLALFASALNLPFEFHP-VVDRLEDVRLWM 447
                     ***************************************************....9**************************.7*********** PP

            GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
                     L+vk++E++aVn++lqlh++l +++      +++L l++s++P +v ++e+ea+hns+s+ +r++++l+yysa+fdsl+a+lp +s  rik+E++
  XP_026380021.1 448 LHVKEKESVAVNCILQLHKMLYDQTGGVL--RDFLGLIRSTNPGIVLMAEEEAEHNSPSLETRVSNSLKYYSAIFDSLDANLPLNSPVRIKIEEM 540
                     ********************976655554..79************************************************************** PP

            GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                      ++rei+n+v+ceg +r erhe + kWr  + + GFk+v ++++++ q ++ll++++sd +++e   e+ + l+l W d++L++vSaW
  XP_026380021.1 541 -FAREIRNIVSCEGIDRSERHECFDKWRVSMAQGGFKNVVIEDREMLQSRMLLKMYSSDKFSLEkrgEDGAGLTLKWLDQSLYTVSAW 627
                     .********************************************************999****6655578888************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 643 aa     Download sequence    
MLAGCSKLLS PTRHGLRSEA TAQFQAVCNF QLPSMSTQRR ELPCNFTRNT SRSQQPIRPV  60
GLSVEKGFES KGSCSIRHKS RPPPSLSIPQ PLIWEGRRGV EDVFWEEEKK SLKRQNSSDE  120
CGVNRVKRKR CSSDSELGSE NIWFSQNVTG SGVTGTETPS LTAAKEERVS FLPRSTWMDF  180
VVNEITATGD RGAAETSRAI TKVKPGSSNS SESRSLTLKP EDNSSDDIEI GNGTRVPYPS  240
EGRLTARNGG DVQAEHQDFE LLGFLVACVE SISSKNMSAI THYLSRLGEL ASPEGNTIRR  300
VTAYFTEALA LRAARLWPHI FHVSVPRDID RAEDETASAL RLLNHVSPIP KFLHFTSNEM  360
YLRSFEGKDR VHIIDFDIKQ GLQWPSLFQS LASRANPPSH VRITGIGESK QDLQETGDRL  420
ALFASALNLP FEFHPVVDRL EDVRLWMLHV KEKESVAVNC ILQLHKMLYD QTGGVLRDFL  480
GLIRSTNPGI VLMAEEEAEH NSPSLETRVS NSLKYYSAIF DSLDANLPLN SPVRIKIEEM  540
FAREIRNIVS CEGIDRSERH ECFDKWRVSM AQGGFKNVVI EDREMLQSRM LLKMYSSDKF  600
SLEKRGEDGA GLTLKWLDQS LYTVSAWAPV DVAGTSSVKS QPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein