PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380022.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 641aa    MW: 71942.3 Da    PI: 7.0542
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS424.11.1e-1292626254373
            GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                      L++c+e +ss+++++++++L+rl elasp+g++++R++ayfteALa r ar ++++++   p++ + + ++e+++al+l+++vsPi+kf h+t 
  XP_026380022.1 262 FLVACVESISSKNMSAITHYLSRLGELASPEGNTIRRVTAYFTEALALRAARLWPHIFHVSVPRDID-RAEDETASALRLLNHVSPIPKFLHFTS 355
                     599*******************************************************999888886.7899999******************** PP

            GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                     N++ l+++eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTg+g+    sk+ l+etg+rLa fA++l++pfef++ v++rled++l++
  XP_026380022.1 356 NEMYLRSFEGKDRVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGIGE----SKQDLQETGDRLALFASALNLPFEFHP-VVDRLEDVRLWM 445
                     ***************************************************....9**************************.7*********** PP

            GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
                     L+vk++E++aVn++lqlh++l +++      +++L l++s++P +v ++e+ea+hns+s+ +r++++l+yysa+fdsl+a+lp +s  rik+E++
  XP_026380022.1 446 LHVKEKESVAVNCILQLHKMLYDQTGGVL--RDFLGLIRSTNPGIVLMAEEEAEHNSPSLETRVSNSLKYYSAIFDSLDANLPLNSPVRIKIEEM 538
                     ********************976655554..79************************************************************** PP

            GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                      ++rei+n+v+ceg +r erhe + kWr  + + GFk+v ++++++ q ++ll++++sd +++e   e+ + l+l W d++L++vSaW
  XP_026380022.1 539 -FAREIRNIVSCEGIDRSERHECFDKWRVSMAQGGFKNVVIEDREMLQSRMLLKMYSSDKFSLEkrgEDGAGLTLKWLDQSLYTVSAW 625
                     .********************************************************999****6655578888************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    
MNFSSKIWII RHGLRSEATA QFQAVCNFQL PSMSTQRREL PCNFTRNTSR SQQPIRPVGL  60
SVEKGFESKG SCSIRHKSRP PPSLSIPQPL IWEGRRGVED VFWEEEKKSL KRQNSSDECG  120
VNRVKRKRCS SDSELGSENI WFSQNVTGSG VTGTETPSLT AAKEERVSFL PRSTWMDFVV  180
NEITATGDRG AAETSRAITK VKPGSSNSSE SRSLTLKPED NSSDDIEIGN GTRVPYPSEG  240
RLTARNGGDV QAEHQDFELL GFLVACVESI SSKNMSAITH YLSRLGELAS PEGNTIRRVT  300
AYFTEALALR AARLWPHIFH VSVPRDIDRA EDETASALRL LNHVSPIPKF LHFTSNEMYL  360
RSFEGKDRVH IIDFDIKQGL QWPSLFQSLA SRANPPSHVR ITGIGESKQD LQETGDRLAL  420
FASALNLPFE FHPVVDRLED VRLWMLHVKE KESVAVNCIL QLHKMLYDQT GGVLRDFLGL  480
IRSTNPGIVL MAEEEAEHNS PSLETRVSNS LKYYSAIFDS LDANLPLNSP VRIKIEEMFA  540
REIRNIVSCE GIDRSERHEC FDKWRVSMAQ GGFKNVVIED REMLQSRMLL KMYSSDKFSL  600
EKRGEDGAGL TLKWLDQSLY TVSAWAPVDV AGTSSVKSQP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein