PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380056.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 795aa    MW: 86269.3 Da    PI: 5.5392
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.12e-2064119156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+++l L+ rqVk+WFqNrR+++k
  XP_026380056.1  64 KKRYHRHTPQQIQELEALFKECPHPDEKQRNELSRRLVLEARQVKFWFQNRRTQMK 119
                     688999***********************************************999 PP
2START184.94.2e-582865092206
                     HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     la +a++elv++a+ +ep+W  ss     e  n+de+++ f++  +     + +ea r++gvv+ +++ lve+l+d k ++  +++    ++ t+
  XP_026380056.1 286 LAMAAMEELVRMAQTNEPVWIPSSfeggkETFNRDEYTRMFAPCIGskpngFVTEATRETGVVIVNSVALVETLMDAK-RYVDMFPcviaRCNTT 379
                     57799**********************99999*********9988899999***************************.99999999999***** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vissg      galqlm ae+q+lsplv  R++ f+R+++q+ +g+w++vd+Svd +q+++ +     +++lpSg++i++++ng++kvtwveh+
  XP_026380056.1 380 DVISSGvggtrnGALQLMHAEFQVLSPLVQiREVNFLRFCKQHAEGVWAVVDISVDANQENS-DTYTYLSRRLPSGCVIQDMPNGYCKVTWVEHA 473
                     *************************************************************9.56666679************************ PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h ++++lv+ gl +ga++wvatlqrqce+
  XP_026380056.1 474 EYDENSIHRIYQPLVNAGLGFGAQKWVATLQRQCEC 509
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 795 aa     Download sequence    
MDGHGGGGGG DRFGENLDGG SGLLGGGARL LDGRELDEYE SRSGSDNMDG ANSDDQDTDK  60
PPRKKRYHRH TPQQIQELEA LFKECPHPDE KQRNELSRRL VLEARQVKFW FQNRRTQMKT  120
QIERHENSIL RQENDKLRAE NMNVREAMRN PMCNNCGGAA VLGDVSLEEQ HLRVENARLK  180
EELDRVCALA GKFLGRPVSS IGDPLPPSMQ ISAGLDLAVG INGGFGGMNH GMSGVNPNLL  240
MGNNNNQFRG SGGSGGMPAM SMVPHQQQSI SSGVDRSVEN SMYLDLAMAA MEELVRMAQT  300
NEPVWIPSSF EGGKETFNRD EYTRMFAPCI GSKPNGFVTE ATRETGVVIV NSVALVETLM  360
DAKRYVDMFP CVIARCNTTD VISSGVGGTR NGALQLMHAE FQVLSPLVQI REVNFLRFCK  420
QHAEGVWAVV DISVDANQEN SDTYTYLSRR LPSGCVIQDM PNGYCKVTWV EHAEYDENSI  480
HRIYQPLVNA GLGFGAQKWV ATLQRQCECI AILMSNMPIR DQTGITQSGR KSMLKLAQRM  540
TQNFCAGVCP SSVHKWNRLS AGNVDADVRV MTRKSIDDPG EPPGVVLSAA TSVWLPISPQ  600
KLFDFLRDER LRSEWDILSN GGPMQQMSHI NKGQDPGNCV SLLRAGAMNA SQSSMLILQE  660
TCIDASGSLV VYAPVDIPAM HVVMSGGDSA YVALLPSGFS IVPDGGPHRQ SISNCADPPN  720
GSNNNDGSDG GGSSSQQLTS DAAGPGASGS LLTVAFQILV NSLPTAKLTV ESVETVNNLI  780
SCTVQKIKAA LNCEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein