PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380069.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 161aa    MW: 17785.2 Da    PI: 9.468
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260742.9e-236101197
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +C+ C++ r +C+++C +a+ fp     ++++vhk+FGa++ l++++++++e +++a +sl+ +A+ar+ dPv+G  g  ++l+ q++ql+ael 
  XP_026380069.1   6 RCEKCRFDRHRCPANCRYAQFFPLGTDDDYKAVHKVFGARKFLSIVDRADPE-QNIASQSLIRQARARVADPVNGLGGSAMQLRGQVNQLRAELI 99 
                     6***********************************************7776.57999**********************************997 PP

          DUF260  96 ll 97 
                     ++
  XP_026380069.1 100 SV 101
                     65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MVKIDRCEKC RFDRHRCPAN CRYAQFFPLG TDDDYKAVHK VFGARKFLSI VDRADPEQNI  60
ASQSLIRQAR ARVADPVNGL GGSAMQLRGQ VNQLRAELIS VGIPIRGDIV PQEPPRRCCS  120
TGTTGGRTTS AEREILWGLQ ASEKNVSINL SSTSSIHSSK E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50510.11e-15LBD family protein