PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380238.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 193aa MW: 22658.5 Da PI: 6.5469

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	52.7	5.3e-17	1	32	20	51
HHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 20 ilKKAeELSvLCdaevaviifsstgklyeyss 51 +lKKA+ELSvLC+aeva+i+fs++gklye+ss XP_026380238.1 1 MLKKAFELSVLCEAEVALIVFSPRGKLYEFSS 32 59****************************96 PP
2	K-box	82.9	7.1e-28	57	150	4	97
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 s++k+ ee+++++l+ e+a+L+k+ienL+ ++R+l+Ge+Les+s+ eLq e+qLeksl +iR+kKn+l++e+ie+l++kek+l een+ L +k XP_026380238.1 57 SNNKAIEERNSQQLKYEAANLEKKIENLEASKRKLMGEGLESCSIDELQTTENQLEKSLLSIRAKKNQLYREKIEQLKQKEKQLLEENEVLCQK 150 3344499***********************************************************************************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MLKKAFELSV LCEAEVALIV FSPRGKLYEF SSSSSSMQKT IDRYQKYNKD VQVNYSSNNK 60 AIEERNSQQL KYEAANLEKK IENLEASKRK LMGEGLESCS IDELQTTENQ LEKSLLSIRA 120 KKNQLYREKI EQLKQKEKQL LEENEVLCQK CGPRQWEQQN QQNHQQREII PYETSPDSHE 180 VETELQIGRP ERR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	9e-49	MIKC_MADS family protein