PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380239.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 179aa MW: 20858.4 Da PI: 5.4721

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	52.9	4.7e-17	1	32	20	51
HHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 20 ilKKAeELSvLCdaevaviifsstgklyeyss 51 +lKKA+ELSvLC+aeva+i+fs++gklye+ss XP_026380239.1 1 MLKKAFELSVLCEAEVALIVFSPRGKLYEFSS 32 59****************************96 PP
2	K-box	64	5.4e-22	57	152	4	97
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke..kelqeenkaLrk 96 s++k+ ee+++++l+ e+a+L+k+ienL+ ++R+l+Ge+Les+s+ eLq e+qLeksl +iR+kK++ lle+ e l +k ++ +++n++ ++ XP_026380239.1 57 SNNKAIEERNSQQLKYEAANLEKKIENLEASKRKLMGEGLESCSIDELQTTENQLEKSLLSIRAKKEKQLLEENEVLCQKCgpRQWEQQNQQNHQ 151 3344499********************************************************************99888433677777777766 PP K-box 97 k 97 + XP_026380239.1 152 Q 152 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MLKKAFELSV LCEAEVALIV FSPRGKLYEF SSSSSSMQKT IDRYQKYNKD VQVNYSSNNK 60 AIEERNSQQL KYEAANLEKK IENLEASKRK LMGEGLESCS IDELQTTENQ LEKSLLSIRA 120 KKEKQLLEEN EVLCQKCGPR QWEQQNQQNH QQREIIPYET SPDSHEVETE LQIGRPERR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	9e-49	MIKC_MADS family protein