PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380287.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 250aa    MW: 28577.1 Da    PI: 4.5148
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.21.9e-222771145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    ++i++ks+ qvtfskRr+g++KKA ELSvL++a+va+i fs+ gk
  XP_026380287.1 27 EKIKDKSRLQVTFSKRRKGLFKKATELSVLTGAQVALIAFSPAGK 71
                    579****************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MMMNQVMMIE MKTQRKGGDG RKRIKIEKIK DKSRLQVTFS KRRKGLFKKA TELSVLTGAQ  60
VALIAFSPAG KPYVCGNPDL LVDRFVNGEP SEVHQKDHDD PEQRRYMEVE KELEAEKKRG  120
VFLESLINCD LGSGNDKSWW DTYVDGLSLD ELKQMRSDME QLQKCVAQRS NDLKMNSNTA  180
SSSSSSYEEK SLALMKLPAG NDDIIDDDYL NEEMVNELVF DFDSQEYDFG TTTSTDQEIT  240
ADMFSDDYCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-25M-type_MADS family protein