PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380324.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 247aa    MW: 25704.1 Da    PI: 7.7705
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.53.1e-40301301100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael
  XP_026380324.1  30 PCGACKFLRRKCVNGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHRRLDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVNLQAEL 124
                     7***********************9989******************************************************************* PP

          DUF260  95 allkee 100
                      +l+++
  XP_026380324.1 125 TYLQAH 130
                     *99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MSANACSSSG GGGGGSSGCG SGGNSSGGGP CGACKFLRRK CVNGCIFAPY FDSEQGAAHF  60
AAVHKVFGAS NVSKLLLHIP VHRRLDAVVT ICYEAQARLR DPVYGCVSHI FALQQQVVNL  120
QAELTYLQAH LATLELPSPP PSLLSPPPLS ISDLPSAATM PATFDLSALF DPLVQPPWTM  180
QQQQQQQSRH STDIVQQFGG GINRNPNDIS LAGGNGDLQT LARELLHRNG SLGVSAPLAG  240
PSAPPPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.17e-71LBD family protein