PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380575.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family BBR-BPC
Protein Properties Length: 300aa    MW: 33250.9 Da    PI: 10.5382
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind283.68.6e-8733008301
       GAGA_bind   8 e.rnkg.yyepaaslkenlglqlmssiaerdaki...........rernlalsekkaavaerd........................maflqrdk 65 
                     + rn+  yyep    + + gl+l s   erd+k+           r++++        + + +                         +    d 
  XP_026380575.1   3 NlRNWHgYYEPP--HRGHSGLNLSSPT-ERDTKPlfnnqhgggigRNHQV--------MVNNNmnnggvyhphrvvdigmpethlphLNTSSVDF 86 
                     2389987***98..6889999986665.9*****9976666666522222........2222233333333335888999999988877888899 PP

       GAGA_bind  66 alaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpk 160
                     +l++r++  v+ + + l+ + + n        +++ ls+++  + lq+         +++++ ++     p    ++ ++ +   kkr  ++ +k
  XP_026380575.1  87 WLNQRQDVKVNMNGNHLNHMNHIN--------SYGGLSEASGSHGLQN--------IPQQAEAMKVERMVP---MEPPINGNGPLKKRPGGRAQK 162
                     999966655555444443333333........3556666666665555........222222222222233...233334444555566677788 PP

       GAGA_bind 161 ekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRi 255
                     ++k kk+k+  +k+++   ++   + s+  +ks+++++ng+++D s +P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP+s krrgaRi
  XP_026380575.1 163 SPKPKKPKRVVPKDEDGIPTQ---RASRPARKSMGVNINGIDIDLSVIPIPVCSCTGAPQQCYRWGCGGWQSACCTTSISMYPLPMSNKRRGARI 254
                     888888888665554444444...469******************************************************************** PP

       GAGA_bind 256 agrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     agrKmSqgafkk+LekLa+eGy+ls p+DL++hWAkHGtnkfvtir
  XP_026380575.1 255 AGRKMSQGAFKKVLEKLATEGYSLSSPIDLRTHWAKHGTNKFVTIR 300
                     *********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDNLRNWHGY YEPPHRGHSG LNLSSPTERD TKPLFNNQHG GGIGRNHQVM VNNNMNNGGV  60
YHPHRVVDIG MPETHLPHLN TSSVDFWLNQ RQDVKVNMNG NHLNHMNHIN SYGGLSEASG  120
SHGLQNIPQQ AEAMKVERMV PMEPPINGNG PLKKRPGGRA QKSPKPKKPK RVVPKDEDGI  180
PTQRASRPAR KSMGVNINGI DIDLSVIPIP VCSCTGAPQQ CYRWGCGGWQ SACCTTSISM  240
YPLPMSNKRR GARIAGRKMS QGAFKKVLEK LATEGYSLSS PIDLRTHWAK HGTNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.16e-70BBR-BPC family protein