PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380589.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 676aa MW: 73458.2 Da PI: 6.0039

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.5	3e-28	237	290	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl XP_026380589.1 237 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 290 79*****************.******************************8 PP
2	Myb_DNA-binding	40.2	7.8e-13	239	289	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ XP_026380589.1 239 RVVWSVELHQQFVSAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 289 678**********************************************97 PP
3	Response_reg	75	2.9e-25	51	159	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+q+l++ y v+++ +++ al+ll+e++ +D+++ D+ mp+mdG++ll+ e++lp+i+++a g + + + +k G XP_026380589.1 51 VLVVDDDATCLRILEQMLRRCMY-LVTTCCQATVALNLLRERKgcFDVVISDVHMPDMDGFKLLELVGL-EMDLPVIMMSADGRTSAVMRGIKHG 143 89*******************.************************************87754.558****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ eel + XP_026380589.1 144 ACDYLIKPVRFEELKN 159 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MAAVQKYQVV SSMSTSGSNY GSSSISNTNK VVVDSGGGGG VSDQFPVGLR VLVVDDDATC 60 LRILEQMLRR CMYLVTTCCQ ATVALNLLRE RKGCFDVVIS DVHMPDMDGF KLLELVGLEM 120 DLPVIMMSAD GRTSAVMRGI KHGACDYLIK PVRFEELKNI WQHVVRKKYG GSKEPEQSGS 180 VEESGDRYKQ GGDDADYASS ANEGTDGSWK VQKKRKDTKD EEDDGEYDND DPSAAKKPRV 240 VWSVELHQQF VSAVNQLGID KAVPKRILEL MNVPGLTREN VASHLQKFRL YLKRLSGVAH 300 QQGGVSSPFY SPVDSNPKLG SLGRLDIQAL AASGQIPAQT LAALHAEVLG RPTGTLVLSD 360 MDKPVLLQSS LQSHKVLPGE RRASYGHPIV KSSIPKQFSQ SHLPMEDFPS MFGSWPSNNM 420 STVNSLGNHG DLNTQNSNML MQMFQQQQQS GLPETSHGTN VQPSCVVVPS QSPTSYQAVN 480 ASIHLNQNSA FSSSPVIDYN LLSSQSNSVS VGLGQQISDV DHFKNNGVLN GYSLPVSVSQ 540 SMSFSPPVQA DNNASWQVQS PGMGFSTTSK LSGLAPNMNE IQSSIYIPTN SDSSSQGRTM 600 NLGFVNRGTS YPSRFAVDDF DSSFDNVNSV RTSADNYGIG DRVKQETNLE FAESDNVTLP 660 VLQHYPPNDL MSVLSK

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MAAVQKYQVV SSMSTSGSNY GSSSISNTNK VVVDSGGGGG VSDQFPVGLR VLVVDDDATC  60
LRILEQMLRR CMYLVTTCCQ ATVALNLLRE RKGCFDVVIS DVHMPDMDGF KLLELVGLEM  120
DLPVIMMSAD GRTSAVMRGI KHGACDYLIK PVRFEELKNI WQHVVRKKYG GSKEPEQSGS  180
VEESGDRYKQ GGDDADYASS ANEGTDGSWK VQKKRKDTKD EEDDGEYDND DPSAAKKPRV  240
VWSVELHQQF VSAVNQLGID KAVPKRILEL MNVPGLTREN VASHLQKFRL YLKRLSGVAH  300
QQGGVSSPFY SPVDSNPKLG SLGRLDIQAL AASGQIPAQT LAALHAEVLG RPTGTLVLSD  360
MDKPVLLQSS LQSHKVLPGE RRASYGHPIV KSSIPKQFSQ SHLPMEDFPS MFGSWPSNNM  420
STVNSLGNHG DLNTQNSNML MQMFQQQQQS GLPETSHGTN VQPSCVVVPS QSPTSYQAVN  480
ASIHLNQNSA FSSSPVIDYN LLSSQSNSVS VGLGQQISDV DHFKNNGVLN GYSLPVSVSQ  540
SMSFSPPVQA DNNASWQVQS PGMGFSTTSK LSGLAPNMNE IQSSIYIPTN SDSSSQGRTM  600
NLGFVNRGTS YPSRFAVDDF DSSFDNVNSV RTSADNYGIG DRVKQETNLE FAESDNVTLP  660
VLQHYPPNDL MSVLSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	1e-122	ARR-B family protein