PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380869.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family YABBY
Protein Properties Length: 209aa    MW: 23338.1 Da    PI: 8.174
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY235.89.6e-73121803170
           YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelle.elkveeenlksnvekeesastsv 96 
                     ++  s++vCyv+CnfCntilavsvP ts+f+vvtvrCGhC++llsvn+   sq+l++   ++++  ++ ++ +l +++ nl+  ++++e  ++s 
  XP_026380869.1  12 LDVPSGHVCYVHCNFCNTILAVSVPGTSMFNVVTVRCGHCANLLSVNMGSVSQTLPSPPSISHHQDHNNHQyHLLHQNWNLSHDDTSKEYGMASY 106
                     567899****************************************************9998877666544145555667777788888888888 PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     + +k s +++e  pr+ p+   PekrqrvPsaynrfikeeiqrikasnPdi+hreafs aaknWahfP+ihfgl
  XP_026380869.1 107 KCNKPSVQNEEPPPRMLPIRPAPEKRQRVPSAYNRFIKEEIQRIKASNPDITHREAFSSAAKNWAHFPHIHFGL 180
                     888889999999******7777**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MSQQSSSSSS SLDVPSGHVC YVHCNFCNTI LAVSVPGTSM FNVVTVRCGH CANLLSVNMG  60
SVSQTLPSPP SISHHQDHNN HQYHLLHQNW NLSHDDTSKE YGMASYKCNK PSVQNEEPPP  120
RMLPIRPAPE KRQRVPSAYN RFIKEEIQRI KASNPDITHR EAFSSAAKNW AHFPHIHFGL  180
TVDSNKQAAK VDDAFIAGDQ GTQKTQQFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.14e-57YABBY family protein