PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026381280.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 467aa MW: 52777.2 Da PI: 6.8905

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026381280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.2e-16	178	223	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_026381280.1 178 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 223 899***************************.*********996 PP
2	Myb_DNA-binding	52.3	1.3e-16	230	273	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ XP_026381280.1 230 RRAFSEEEEEKLMSAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHV 273 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MQQHDIAETV QHCCYIIYHH QVYQDMNNNS ASNNKYNTPT AATTTENCNS TSFAPSMGLF 60 AEISSLSINP NGFSSKDSKY ICSMNNLEMV SKKTSCMGIP FLTNSNNSLV DQLHLNQSEK 120 CASGGKGSDF SDGFQGNNGM NMDQDNSNSN LINEENPYDS ISVNGKEIDG GQSKLCARGH 180 WRPAEDSKLK ELVALYGPQN WNLIAEKLEG RSGKSCRLRW FNQLDPKINR RAFSEEEEEK 240 LMSAHRVYGN KWAMIARLFP GRTDNAVKNH WHVIMARKFR EQSNVYRRRK LSQTVHRKLD 300 DNSSLTTEQN CFDLTNGSFT SLSPYPFSTS INTEYMFLGS SNNNNKISPD HQSGFCGADQ 360 TTFDPFTGSR NQDLTRFLRQ SWERPRDESS FYHHPHHYQQ QQQTLTQMMT MQQSNHSHPS 420 IFSNSMTSTS QVSDIEASAS IAENRGVTHF ETTISPPFID FLGVGAT

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MQQHDIAETV QHCCYIIYHH QVYQDMNNNS ASNNKYNTPT AATTTENCNS TSFAPSMGLF  60
AEISSLSINP NGFSSKDSKY ICSMNNLEMV SKKTSCMGIP FLTNSNNSLV DQLHLNQSEK  120
CASGGKGSDF SDGFQGNNGM NMDQDNSNSN LINEENPYDS ISVNGKEIDG GQSKLCARGH  180
WRPAEDSKLK ELVALYGPQN WNLIAEKLEG RSGKSCRLRW FNQLDPKINR RAFSEEEEEK  240
LMSAHRVYGN KWAMIARLFP GRTDNAVKNH WHVIMARKFR EQSNVYRRRK LSQTVHRKLD  300
DNSSLTTEQN CFDLTNGSFT SLSPYPFSTS INTEYMFLGS SNNNNKISPD HQSGFCGADQ  360
TTFDPFTGSR NQDLTRFLRQ SWERPRDESS FYHHPHHYQQ QQQTLTQMMT MQQSNHSHPS  420
IFSNSMTSTS QVSDIEASAS IAENRGVTHF ETTISPPFID FLGVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-75	MYB family protein