PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026381369.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 290aa    MW: 33591.3 Da    PI: 6.1863
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026381369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.25e-1783135456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++++ eq+++Le+ Fe  +++  e++ +LA+ l+L+ rq+ +WFqNrRa++k
  XP_026381369.1  83 KRRLNMEQVRTLEKNFELGNKLEPERKLQLARALNLQPRQIAIWFQNRRARWK 135
                     447999**********************************************9 PP
2HD-ZIP_I/II126.61.1e-4081171191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     e+krrl+ eqv++LE++Fe  +kLeperK +lar+L+lqprq+a+WFqnrRAR+ktkqlEkdy++Lkr+++a+k++ne+L++++++L++e+
  XP_026381369.1  81 ERKRRLNMEQVRTLEKNFELGNKLEPERKLQLARALNLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAVKADNESLQAQNKKLHAEI 171
                     69**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MDFFPANFML QQQQQQQQNN EEDHHQHHSI NPMLNSCNPQ DFHGVASLLG KRSMSFSGVE  60
LMREEMNGDE ELSDDGSQAG ERKRRLNMEQ VRTLEKNFEL GNKLEPERKL QLARALNLQP  120
RQIAIWFQNR RARWKTKQLE KDYDVLKRQF EAVKADNESL QAQNKKLHAE ILALKSREQP  180
TELINLNKET EGSSSNRSDN SSDLNLDISR TSAIDSPNPT SRPFFPTSVR PTTMVQLLQS  240
SSVKSEYQCP SRIVEHHQTV QDEGFSNMFC SIDDQPAFWP WAAPEHQQFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18186ERKRRL
2130138RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.17e-88HD-ZIP family protein