PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026381471.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 618aa MW: 70393.6 Da PI: 6.26

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026381471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.4	1.8e-24	215	268	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_026381471.1 215 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 268 68*****************.9*****************************8 PP
2	Myb_DNA-binding	37.9	4.1e-12	217	267	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_026381471.1 217 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 267 678***********************************************7 PP
3	Response_reg	80.4	6.1e-27	35	143	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l++ y ev+++ +++al+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_026381471.1 35 VLVVDDDPTWLKILEKMLKRCSY-EVTTCCLARDALDLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 127 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el + XP_026381471.1 128 ACDYLLKPVRMKELKN 143 **********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MVMDQYHHHH RSMEINNNGY VSSPRSDSFP IGLRVLVVDD DPTWLKILEK MLKRCSYEVT 60 TCCLARDALD LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV 120 MKGVQHGACD YLLKPVRMKE LKNIWQHVLR KKIHEVRDIE SYEGNEEILF RNGSERFEEG 180 NFLLGSDLSS GKKRKETDNK ECDDQEYSDF SSVKKARVVW SVDLHQKFVN AVNQIGFDKV 240 GPKKILDLMN VPWLTRENVA SHLQKYRLYL SRLQKPNDPK SSFCGIKQPD FSQKDPPMTF 300 AHKSSSPVLQ NTAANGSFGY TSSNLLVEGA ALETHEGDLN GIISFKSVTE PRSRKTLNGD 360 VPSPRKANNS QIGFSHSLVL PELDVNNISF EANISQKHSW NREVPIMRMK QLPKQEQKLY 420 GYTHLALLSQ QNKIQSESLQ PSPSSINLGT SVGERDKACH LEIKPLHLED KSDDFKHGFP 480 TAPHISNLLQ ADAENTSSQE FRPILRINTD LPCMKLQGYN QHCTNTNAST WKPDQRNQIQ 540 GNESTSYCSQ QESHLGLLQD YLFIEDVELN NIASMNYHDP DMFADVPAHL LDKVRFTNDY 600 LCESTLEYPI MDQGLFIA

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MVMDQYHHHH RSMEINNNGY VSSPRSDSFP IGLRVLVVDD DPTWLKILEK MLKRCSYEVT  60
TCCLARDALD LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV  120
MKGVQHGACD YLLKPVRMKE LKNIWQHVLR KKIHEVRDIE SYEGNEEILF RNGSERFEEG  180
NFLLGSDLSS GKKRKETDNK ECDDQEYSDF SSVKKARVVW SVDLHQKFVN AVNQIGFDKV  240
GPKKILDLMN VPWLTRENVA SHLQKYRLYL SRLQKPNDPK SSFCGIKQPD FSQKDPPMTF  300
AHKSSSPVLQ NTAANGSFGY TSSNLLVEGA ALETHEGDLN GIISFKSVTE PRSRKTLNGD  360
VPSPRKANNS QIGFSHSLVL PELDVNNISF EANISQKHSW NREVPIMRMK QLPKQEQKLY  420
GYTHLALLSQ QNKIQSESLQ PSPSSINLGT SVGERDKACH LEIKPLHLED KSDDFKHGFP  480
TAPHISNLLQ ADAENTSSQE FRPILRINTD LPCMKLQGYN QHCTNTNAST WKPDQRNQIQ  540
GNESTSYCSQ QESHLGLLQD YLFIEDVELN NIASMNYHDP DMFADVPAHL LDKVRFTNDY  600
LCESTLEYPI MDQGLFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-122	ARR-B family protein