PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026381740.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 345aa    MW: 37906.3 Da    PI: 9.1837
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026381740.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.38.7e-14123167347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_026381740.1 123 PWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 167
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MMMSRNCSQC GNNGHNSRTC GDVNVNGNSN THDDAGNNNN TNGFMLFGVR VTEGSSNPMI  60
RKCVSMNNLS QYQQIQEPVN VNTANINTNT SAHDHDASSG YASDDVVHNS IGVRDRDRKR  120
GVPWTEEEHR LFLLGLQKVG KGDWRGISRN FVKTRTPTQV ASHAQKYFLR RSNLNRRRRR  180
SSLFDITTEE EESTGENQNH IPISPSYSNG ELGFSSSSAS SFQLNLGISA SSSVDDLTSL  240
NKHRSNIIRP IPVFPIPPSS RMGNLSLDSK KSKSKVDDYH PQHHQSTVLS LNLGSTSVSS  300
SSQQQQTISN SSRHSASYNQ QNSNSFSSSS DGDLDLNGGN VIRVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.24e-63MYB_related family protein