PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026381813.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 290aa    MW: 33021.2 Da    PI: 4.502
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026381813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-2066119356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t++q+  Le+ Fe ++++  +++++LAkklgL+ rqV vWFqNrRa++k
  XP_026381813.1  66 KKRRLTADQVLMLEKSFEAENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWK 119
                     56789************************************************9 PP
2HD-ZIP_I/II130.85.2e-4265156192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ekkrrl+++qv +LE+sFe+e+kLep+rK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd l ++ +++ ke+e+L++e+ 
  XP_026381813.1  65 EKKRRLTADQVLMLEKSFEAENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDCLLSNYDSIVKETEKLKSEVV 156
                     69**************************************************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MHSGSRLFFD GSYHGNMLVL GNGDNGFQGA RSVLNHEESS KRRLFFSSSA EDLYDEEFYD  60
EQLPEKKRRL TADQVLMLEK SFEAENKLEP DRKTQLAKKL GLQPRQVAVW FQNRRARWKT  120
KQLERDYDLL KSSYDCLLSN YDSIVKETEK LKSEVVLLNG KLQTNKEVTG MVEAGQKHDP  180
PILFNNKNDD GDDTATNDVL GDCAFEIKTE DHLSSGSGGS AVVDEHDGRQ LVDSGHSYFP  240
ESVYHGYMGP VDVTNVQSEE DDGSDDNQSY WAAENLQEHD AEPLNWWVWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114122RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-82HD-ZIP family protein