PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026382054.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YC
Protein Properties Length: 213aa    MW: 23908.8 Da    PI: 5.2937
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026382054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC170.81.6e-53391384100
           NF-YC   4 sfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 
                     +f ++q   ie+ +dfknh+lPlarikki+kadedv+misaeaP+l+skacelfilelt+rswlhaeenkrrtl+k+di+aa+trtdifdflvdi
  XP_026382054.1  39 MFLSYQrqeIEQINDFKNHQLPLARIKKIMKADEDVRMISAEAPILFSKACELFILELTIRSWLHAEENKRRTLQKNDISAAITRTDIFDFLVDI 133
                     555544445************************************************************************************** PP

           NF-YC  96 vprde 100
                     vpr+e
  XP_026382054.1 134 VPREE 138
                     ***97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MENNKHLMNP NHNQSSTSPY PTQQSFESLM QQQTQKIQMF LSYQRQEIEQ INDFKNHQLP  60
LARIKKIMKA DEDVRMISAE APILFSKACE LFILELTIRS WLHAEENKRR TLQKNDISAA  120
ITRTDIFDFL VDIVPREEEV VKGGAVGAVA IGRPAMVGGM DHGVYEHQPS QAWQSVWQTD  180
DGGAYGGGGS AENHGNLEGI TGYVVEHNPS DSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109115RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.21e-73NF-YC family protein