PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382065.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 964aa MW: 108475 Da PI: 5.5832

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	144.2	3.7e-45	13	127	3	115
CG-1 3 ke.kkrwlkneeiaaiLenfe.kheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 +e + rwl++ ei iL n++ + +t+ +++p+sgsl+L+n+ +++ frkDG++wkkk+ g+tv E he+LKvggvevl+cyYa++ enp+++ XP_026382065.1 13 QEaQVRWLRPVEIQFILLNHDgIYPFTEVVPQNPQSGSLFLINKNVTKSFRKDGHNWKKKRSGRTVAEGHERLKVGGVEVLSCYYAQGAENPNLR 107 56599***********99846889999************************************************************** PP CG-1 96 rrcywlLeeelekivlvhyl 115 rr+yw+L++++++ivlvh++ XP_026382065.1 108 RRIYWMLDQAYHHIVLVHHR 127 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MNDPEYDINT LIQEAQVRWL RPVEIQFILL NHDGIYPFTE VVPQNPQSGS LFLINKNVTK 60 SFRKDGHNWK KKRSGRTVAE GHERLKVGGV EVLSCYYAQG AENPNLRRRI YWMLDQAYHH 120 IVLVHHRVYT DINEGRRSAE SSSTLNFPSV SNTGFQIAPN QAAASAVSES YGTYLDPSPF 180 SSGSMDLIPD LLDEKLFEEW DSPEDICSLM DADEGSLAEQ RIVENLNEKS TDTEILLQQN 240 MSDLDELLAA QLGPDYGENV VHSCEIEKPQ STSERDKYTT DPYKNNEEYL YQLQDPSGNN 300 TQNRNVHIPI FGEASNFYPT ASIQESSLLF AVDNSTVFSY SYGLNTLEAD PNCYSTLFDA 360 ETQLAPIEVV SRLTVAQSQK FSIQEISPEW GYAAEFSKVI ITGLFHCNSS EHSWKCMFGD 420 TEVPVEIVQE GVLRRQTPGQ VSLIQEGVLR CHTPPQSPGK VSLCITVGNR EACSEIREFE 480 FRTNPTTCIQ NNNLPKTDGM RSAEELQLLI RFVQMLLCYP STDKEDGITS RTNASEKLNA 540 DEYLWENLKH AVLVGSESES RIMDSLLQEL LKEKLPQWLH SKFKEGETPG SANLKKDQEI 600 IHVVAGLGFE WALNLILRSG IGINFRDTNG WTALHYAAYF GREEMVVALL VAGASAGAVT 660 DPTPEDPVGK TPGSIAIFRG HKGVAGYLSE LALTSHLRSL TLEESDNSKG LSAAEAEIEA 720 ESLSNGILDC TDDQRSLRQS LEAVRNAALA AARIQNAFRA HSFRKRKQKE DLVSVCHEYG 780 ITAADIPALS ATSKMAFPKL RDQVLQNAAV IIQKKYRGWS RHRTFLELKR KIILIQAHVR 840 GHQVRRKLFR WAVGILEKIL LRWRRKRVGL RGLRQETELA DVSDDEDILK VFRKKKVDVT 900 VEKAVSWVVS MAHSPDARGQ YRRLLASYRQ QVKAESCTET SSASRDDSDS METNNNDDFF 960 RFPL

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MNDPEYDINT LIQEAQVRWL RPVEIQFILL NHDGIYPFTE VVPQNPQSGS LFLINKNVTK  60
SFRKDGHNWK KKRSGRTVAE GHERLKVGGV EVLSCYYAQG AENPNLRRRI YWMLDQAYHH  120
IVLVHHRVYT DINEGRRSAE SSSTLNFPSV SNTGFQIAPN QAAASAVSES YGTYLDPSPF  180
SSGSMDLIPD LLDEKLFEEW DSPEDICSLM DADEGSLAEQ RIVENLNEKS TDTEILLQQN  240
MSDLDELLAA QLGPDYGENV VHSCEIEKPQ STSERDKYTT DPYKNNEEYL YQLQDPSGNN  300
TQNRNVHIPI FGEASNFYPT ASIQESSLLF AVDNSTVFSY SYGLNTLEAD PNCYSTLFDA  360
ETQLAPIEVV SRLTVAQSQK FSIQEISPEW GYAAEFSKVI ITGLFHCNSS EHSWKCMFGD  420
TEVPVEIVQE GVLRRQTPGQ VSLIQEGVLR CHTPPQSPGK VSLCITVGNR EACSEIREFE  480
FRTNPTTCIQ NNNLPKTDGM RSAEELQLLI RFVQMLLCYP STDKEDGITS RTNASEKLNA  540
DEYLWENLKH AVLVGSESES RIMDSLLQEL LKEKLPQWLH SKFKEGETPG SANLKKDQEI  600
IHVVAGLGFE WALNLILRSG IGINFRDTNG WTALHYAAYF GREEMVVALL VAGASAGAVT  660
DPTPEDPVGK TPGSIAIFRG HKGVAGYLSE LALTSHLRSL TLEESDNSKG LSAAEAEIEA  720
ESLSNGILDC TDDQRSLRQS LEAVRNAALA AARIQNAFRA HSFRKRKQKE DLVSVCHEYG  780
ITAADIPALS ATSKMAFPKL RDQVLQNAAV IIQKKYRGWS RHRTFLELKR KIILIQAHVR  840
GHQVRRKLFR WAVGILEKIL LRWRRKRVGL RGLRQETELA DVSDDEDILK VFRKKKVDVT  900
VEKAVSWVVS MAHSPDARGQ YRRLLASYRQ QVKAESCTET SSASRDDSDS METNNNDDFF  960
RFPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	845	867	RRKLFRWAVGILEKILLRWRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-152	CAMTA family protein