PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026382328.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 95aa    MW: 10746.2 Da    PI: 9.9577
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026382328.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.36.7e-0920601455
                    HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +++N+ + +L++l+P + + +s + s + +L+++++YI+sLq
  XP_026382328.1 20 NELNDLLLKLQRLVPDL-RRRSSRGSMSKTLKETCNYISSLQ 60
                    579*************6.58*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MSSRRSSSTS RGSSRMITEN ELNDLLLKLQ RLVPDLRRRS SRGSMSKTLK ETCNYISSLQ  60
KEVDNLSDKI SELMSSMEIT SVEADALRGL LLQQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-21bHLH family protein