PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026382443.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 257aa    MW: 28725.3 Da    PI: 7.7861
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026382443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.61.1e-18101155256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++keq + Lee F++n++++ +++e LA +l+L+ rqV vWFqNrRa+ k
  XP_026382443.1 101 RKKLRLSKEQSRLLEESFRENHTLNPKQKEALAFQLKLKPRQVEVWFQNRRARTK 155
                     788899***********************************************98 PP
2HD-ZIP_I/II120.49.2e-39101189189
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                     +kk+rlskeq++lLEesF+e+++L+p++K++la +L+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++ +l+een+rL++eve+Lr+
  XP_026382443.1 101 RKKLRLSKEQSRLLEESFRENHTLNPKQKEALAFQLKLKPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEQLRA 189
                     69*************************************************************************************93 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MAISPSSNSP SCLDLTISVP GFASSSSASS SSPLSLVPSS EGGGSCSMKN LDMNQVPTFT  60
YSLMEEEEEI DHEYLTIGTR SSLLLDDHDQ ESGGDGKAPP RKKLRLSKEQ SRLLEESFRE  120
NHTLNPKQKE ALAFQLKLKP RQVEVWFQNR RARTKLKQTE MECEYLKRCF GSLTEENRRL  180
QREVEQLRAL RVGPPTILSP NSFEPLQASN ITMCPRCERV TTNSGNASDK CPSAGKTANK  240
QVHHHVLLDS RQPWAAY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150158RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.13e-66HD-ZIP family protein