PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026382493.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 376aa    MW: 41580.6 Da    PI: 6.1692
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026382493.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF22.91.1e-077361241
                    HHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
          SRF-TF 12 tfskRrngilKKAeELSvLCdaevaviifs 41
                    +++ R++g+ KK  E S+L d++++++i++
  XP_026382493.1  7 SYATRLTGLKKKVREFSTLVDVDACMLIYG 36
                    899*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MLDKEKSYAT RLTGLKKKVR EFSTLVDVDA CMLIYGGPKQ GGSHHRRRDD QPETFPENRR  60
DVIRIVNRYL GIPKEERIKR HEKLFDGGDG KNKIEEEDDD NLDESVNNKK RGIGSNSDGL  120
EWDDQYDKLS ADELQRLIDS VESKIGIIDE KIQVMENPRS GGVSDPRVVA NNTTQGINNN  180
NNNNNNTSMQ MQMQMQPIYV LQPAFNQNLA AANNGSTGMV PMGVPMGMIN PMSTANGANV  240
PYPIIPMVPM LAARPSGRNN MVPMMAARPS GRDNMVPMMT VRPSGRDNNN QEVYGNHQGK  300
QVEYFVPQAG NNQGQQVAYI VPQAGNNQGQ QVAYFVPQAG NNQGQQVAYI VPQAFVQPTS  360
STRSFIPDLM PGASDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22590.22e-08M-type_MADS family protein