PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382602.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 255aa MW: 29691.1 Da PI: 5.0088

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.9	3.1e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEd+ll ++++ +G g W+t++++ g+ R +k+c++rw +yl XP_026382602.1 15 RGPWKPEEDLLLTRYIETYGEGKWATVSKRSGLMRGGKSCRLRWKNYL 62 89********************************************97 PP
2	Myb_DNA-binding	50	6.8e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++ E++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_026382602.1 68 RGDMSEAEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 113 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MESEGITKEQ ELLNRGPWKP EEDLLLTRYI ETYGEGKWAT VSKRSGLMRG GKSCRLRWKN 60 YLRPNLKRGD MSEAEEDLII RMHKLLGNRW SLIAGRLPGR TDNEVKNYWN THLTKRDAKP 120 EVPMSKRRKL IDHLADKEST ESTCEDRSPD CKTNDESNNE TERSTINGVT EDESKVAMSE 180 VVSHSWMDDH MKCSSNNDMQ SHWFPMDGKF FDEPYLTSLD SMYFLDSYYG VGVDNYSWTE 240 SFTYGLDDLY PISYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	3e-59	MYB family protein