PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026382687.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 231aa    MW: 25254.5 Da    PI: 7.9583
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026382687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.42.8e-39121131101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkCa+dCv+apyf++eq p++fa++hk+FGasnv+kll ++p  +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l
  XP_026382687.1  12 PCGACKFLRRKCASDCVFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARVRDPVYGCVAHIFALQQQVACLQAQL 106
                     7*************************99******************************************************************* PP

          DUF260  95 allkeel 101
                      ++k++l
  XP_026382687.1 107 MQAKSQL 113
                     9999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MATGNGGGSG SPCGACKFLR RKCASDCVFA PYFCSEQGPA RFAAIHKVFG ASNVSKLLLH  60
VPVPDRCEAV VTIAYEAQAR VRDPVYGCVA HIFALQQQVA CLQAQLMQAK SQLVNKVAAD  120
TRSSLENHNW MENVAAAAAV TSQHMSYPAT YMRSSVSPQS SLESVDNSNC SNNIDISSMQ  180
GMHYTSSDRD SGYNTNDHLH SYQPYNKKRM ISNNELGELQ ALALRMMRND F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.14e-56LBD family protein