PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382762.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 364aa MW: 41247.3 Da PI: 5.9204

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++++ G+g +W + ++++g++R++k+c++rw++yl XP_026382762.1 14 KGPWSPEEDAKLKNYIEESGTGgNWIALPQKVGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	36.4	1.2e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eE+ ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_026382762.1 69 GGFSEEEENIICSLYVSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKNYIE ESGTGGNWIA LPQKVGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEENIIC SLYVSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQQARRL GCLKQEMKKV MSTTGTFNMV SLSDHNRNYN QYVIPTHQNQ PHIPIPMPYP 180 TQDPDGYMID NNDPIRKLLI KLGGRFCDDQ NNQLLVQNDV GMSAGNNLYF PTLNISSTQE 240 QLYENSPHLA NDQYDIDGVN NLSMLQGLNC YQPVHDVDQM AYYNSQELDG FYGEDNMGNN 300 GYTSAGTSSV ESANWADMAS LVYTPNTVIT IDNYVPQDCN DQQQPGRMLK DCHDFEGDSS 360 FLIM

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKNYIE ESGTGGNWIA LPQKVGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEENIIC SLYVSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQQARRL GCLKQEMKKV MSTTGTFNMV SLSDHNRNYN QYVIPTHQNQ PHIPIPMPYP  180
TQDPDGYMID NNDPIRKLLI KLGGRFCDDQ NNQLLVQNDV GMSAGNNLYF PTLNISSTQE  240
QLYENSPHLA NDQYDIDGVN NLSMLQGLNC YQPVHDVDQM AYYNSQELDG FYGEDNMGNN  300
GYTSAGTSSV ESANWADMAS LVYTPNTVIT IDNYVPQDCN DQQQPGRMLK DCHDFEGDSS  360
FLIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-78	MYB family protein