PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026382819.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 231aa    MW: 26661 Da    PI: 8.7599
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026382819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1591.5e-1888171188
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                     +fY++++k++GF v ks+ kk+   gei ++tf+C + gkr++  +k   + +++a+ ++gC akl++++++   ++++kl+leHnHe
  XP_026382819.1  88 EFYKAFGKQAGFPVMKSTFKKN-VAGEIRSYTFTCARAGKRDSVCEK---KLHPQATIKCGCLAKLVLRLDYLIGYVISKLVLEHNHE 171
                     6****************99998.8889**************998766...999**********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MCSVLLVLSF LYYCFSLPSV LLFFLLKKEE ISERRNKMRM VEIEEENSNV KNKEGIPTNS  60
DCIDDDGVKP NIKPVVGMEF KSINDAWEFY KAFGKQAGFP VMKSTFKKNV AGEIRSYTFT  120
CARAGKRDSV CEKKLHPQAT IKCGCLAKLV LRLDYLIGYV ISKLVLEHNH EQNPENARYF  180
RCNRYVNPWV KNQIDLLDRS GVRLYKSYGV CVNGFGGHEN MTWVIFIHQM D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.22e-13FAR1 family protein