PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026383135.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 348aa MW: 39881.4 Da PI: 10.5687

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026383135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.6	2.7e-14	24	114	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ffk+++++ ++ + + +p +f+e+ g++ + +l +sg++W+v+l +++y++++GW++Fv +n + +Df+ Fk++++++ XP_026383135.1 24 FFKIFLSPESFYK--MKVPVEFLEQLtcGIP--G--SFSLCGPSGKVWRVRL--LEMGDGYYFKDGWEDFVIDNFMSNKDFCAFKYVSKNCL--Q 108 7888877777776..799***99875543..4..48889*******..99999*************************987777..9 PP EEEE-S CS B3 94 vkvfrk 99 v++f++ XP_026383135.1 109 VQIFER 114 999987 PP
2	B3	53	6.2e-17	244	334	4	98
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ +s+v + +l lp++f ++h +s+++tl+d++g++W+v+l +++ + lt+GW++ n++++ D+++F+l++ +ef ++++fr XP_026383135.1 244 TMRKSHVYTGFCLPLPRSFWKAHLP--DCSQEMTLRDPRGETWSVRLYVNQIHQVGQLTEGWRKISFTNNIEASDVCIFELVKPNEF--KLHIFR 334 577899***************64..4999************6677777788**********************987888..777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MVKKTRKALT SKSSSLVTRR VPEFFKIFLS PESFYKMKVP VEFLEQLTCG IPGSFSLCGP 60 SGKVWRVRLL EMGDGYYFKD GWEDFVIDNF MSNKDFCAFK YVSKNCLQVQ IFERNGCEKE 120 SAFKANCSQA STTNFSARHK GKKAVKNQGK FPIFKGRAST MNLSARCWGG KAVKNQGKFP 180 IIKGRASTMN RSARCWGKKA VKNQGERLGG PFISRRRDIT VEAEHMALNA ALGFVSKKPY 240 AMITMRKSHV YTGFCLPLPR SFWKAHLPDC SQEMTLRDPR GETWSVRLYV NQIHQVGQLT 300 EGWRKISFTN NIEASDVCIF ELVKPNEFKL HIFRVIEEII PLRRQRDM

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MVKKTRKALT SKSSSLVTRR VPEFFKIFLS PESFYKMKVP VEFLEQLTCG IPGSFSLCGP  60
SGKVWRVRLL EMGDGYYFKD GWEDFVIDNF MSNKDFCAFK YVSKNCLQVQ IFERNGCEKE  120
SAFKANCSQA STTNFSARHK GKKAVKNQGK FPIFKGRAST MNLSARCWGG KAVKNQGKFP  180
IIKGRASTMN RSARCWGKKA VKNQGERLGG PFISRRRDIT VEAEHMALNA ALGFVSKKPY  240
AMITMRKSHV YTGFCLPLPR SFWKAHLPDC SQEMTLRDPR GETWSVRLYV NQIHQVGQLT  300
EGWRKISFTN NIEASDVCIF ELVKPNEFKL HIFRVIEEII PLRRQRDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	4e-22	B3 family protein