PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383136.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 292aa    MW: 33730.1 Da    PI: 9.9766
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3451.9e-1424114199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     ffk+++++ ++ +  + +p +f+e+   g++  +    +l  +sg++W+v+l     +++y++++GW++Fv +n +  +Df+ Fk++++++    
  XP_026383136.1  24 FFKIFLSPESFYK--MKVPVEFLEQLtcGIP--G--SFSLCGPSGKVWRVRL--LEMGDGYYFKDGWEDFVIDNFMSNKDFCAFKYVSKNCL--Q 108
                     7888877777776..799*****99875543..4..48889***********..99999***************************987777..9 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++f++
  XP_026383136.1 109 VQIFER 114
                     999987 PP
2B353.54.4e-17188278498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     ++ +s+v +  +l lp++f ++h     +s+++tl+d++g++W+v+l +++  +   lt+GW++    n++++ D+++F+l++ +ef  ++++fr
  XP_026383136.1 188 TMRKSHVYTGFCLPLPRSFWKAHLP--DCSQEMTLRDPRGETWSVRLYVNQIHQVGQLTEGWRKISFTNNIEASDVCIFELVKPNEF--KLHIFR 278
                     577899*****************64..4999****************6677777788************************987888..777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MVKKTRKALT SKSSSLVTRR VPEFFKIFLS PESFYKMKVP VEFLEQLTCG IPGSFSLCGP  60
SGKVWRVRLL EMGDGYYFKD GWEDFVIDNF MSNKDFCAFK YVSKNCLQVQ IFERNGCEKE  120
SAFKANCSQA STTNFSARHK GKKAVKNQGE RLGGPFISRR RDITVEAEHM ALNAALGFVS  180
KKPYAMITMR KSHVYTGFCL PLPRSFWKAH LPDCSQEMTL RDPRGETWSV RLYVNQIHQV  240
GQLTEGWRKI SFTNNIEASD VCIFELVKPN EFKLHIFRVI EEIIPLRRQR DM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17010.13e-17B3 family protein