PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026383297.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 327aa MW: 37524.1 Da PI: 5.6966

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026383297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.5	1e-12	22	111	6	97
..-HHHHTT-EE--HHH.HTT---...--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 6 tpsdvlksgrlvlpkkfaeehggkke.esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++++v + g + lp kf++++++++ + +l+ +sg +W+vk+ rk++g++++++G F + + +g f+ F++dg+s+f +v +f XP_026383297.1 22 IHNSVIQDGSIELPAKFVKKIEKDPVdDDGVAVLKVPSGVEWRVKM-TRKSDGGVWFSNGIPTFIDCYSISAGHFLFFRYDGNSQF--HVVIF 111 5788999999*********655552334567777******.4777777****************************99..88877 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MGETNEWSSL GEEQRPKFYM IIHNSVIQDG SIELPAKFVK KIEKDPVDDD GVAVLKVPSG 60 VEWRVKMTRK SDGGVWFSNG IPTFIDCYSI SAGHFLFFRY DGNSQFHVVI FNMRGSEIEY 120 HLFEDDNNSN SNDSTSHSNE AENMECFEIQ GSQEEHVDYM ETLSGDSSPD RDESDEDNDE 180 DEVAKKKPSK LAGSKRKSRS LSSSNPKEYV VRANEIERSF ASTSTNPFFR IIVQTSYVEH 240 KYMPIPWTFI RYFPEDLKDV KVVAVSDRRE WKIRVLRSKT DLKLNKGVAD FMNKKNGLNL 300 KVGDVLIFEI VKRRYLVLKV HVFPATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-23	B3 family protein