PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383345.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 668aa    MW: 73988.9 Da    PI: 4.9902
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4041.5e-1233026671374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.......sseelaalklfsevs 88 
                     l +lLl+cAea +++d   a+ +L +l+ +++p gd+mqR+a +fteAL++rl+     +  a p s++++++       s +++  +++ ++++
  XP_026383345.1 302 LLHLLLACAEAAAKKDYIVAKVYLGQLNRIVNPLGDSMQRVACCFTEALSERLSA----ITTANPNSTDQKNDtplpdlnSLDTIRTYQVVYQAC 392
                     579***************************************************9....3333333333333345677779************** PP

            GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                     P+lkf+h+taNqaI ea+egeervH++Dfdi qG QWp+++qaLa+R++g+p lR+Tg+gs    s ++l etg  L+++A++l++pfef++ v+
  XP_026383345.1 393 PYLKFAHFTANQAIFEAFEGEERVHVVDFDILQGYQWPSFMQALAARQGGAPFLRLTGIGS----SPTSLGETGLYLTEIARSLKIPFEFEA-VS 482
                     *************************************************************....9**************************.7* PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                     + le+++++ ++ + gEalaVn++  lhr+     sl++    +L ++ +  P+++++veqea+hn++ Fl rfleal+yysa+fds+ea++ ++
  XP_026383345.1 483 EPLEEVNPHIFQRRLGEALAVNSINVLHRVS--GNSLAN----LLGVIHDQTPEILILVEQEASHNGPYFLGRFLEALHYYSAIFDSMEATFLSN 571
                     ******************************8..555666....**************************************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     se+r+kvE+ + ++ei+n+va  g +r+erhe+ ekWr+ +e  GFk +plse+a++qa+lll  ++ dgyr+ +++g+l+lgW+drp++++S+W
  XP_026383345.1 572 SEDRAKVEKYIYAPEIRNIVASDGPDRVERHEKIEKWRKVMEGKGFKGIPLSENAVTQANLLLGLYSCDGYRLTDDKGCLMLGWQDRPIIAASSW 666
                     *********************************************************************************************** PP

            GRAS 374 r 374
                     r
  XP_026383345.1 667 R 667
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    
MVKSGEPSSY HPLPISPTAS VSESNSINVL PSTSVLGNNP VLSSLNDPQG FKYEEHNMND  60
DVEIQSPDNS AIWNSYFADN DDEASFMISS PRSSNALDLM MVSSPKRTQH MGFNQNYDQG  120
ENTLLHGESM SKYSPASSNS SHMVGGTCNI SNGKSKGQLQ RVFSSPRKKY MKLLRVDQFS  180
TMDENMNGSS TSKDGGFREY STMNMPSLGF NAGGSESGMT LSAMLKCLPS SDSSNIWEST  240
VNKVDVQRDF PTTQEKNASL FSPYRNPFSP AQLSQQQEQQ YTFDNGSFGP LYAQEQVTGL  300
QLLHLLLACA EAAAKKDYIV AKVYLGQLNR IVNPLGDSMQ RVACCFTEAL SERLSAITTA  360
NPNSTDQKND TPLPDLNSLD TIRTYQVVYQ ACPYLKFAHF TANQAIFEAF EGEERVHVVD  420
FDILQGYQWP SFMQALAARQ GGAPFLRLTG IGSSPTSLGE TGLYLTEIAR SLKIPFEFEA  480
VSEPLEEVNP HIFQRRLGEA LAVNSINVLH RVSGNSLANL LGVIHDQTPE ILILVEQEAS  540
HNGPYFLGRF LEALHYYSAI FDSMEATFLS NSEDRAKVEK YIYAPEIRNI VASDGPDRVE  600
RHEKIEKWRK VMEGKGFKGI PLSENAVTQA NLLLGLYSCD GYRLTDDKGC LMLGWQDRPI  660
IAASSWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.14e-89GRAS family protein