PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383411.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 227aa    MW: 25818.4 Da    PI: 6.8468
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H223.71.2e-07143164223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                      C++Cgk F+r  nL+ H+r H
  XP_026383411.1 143 FCEICGKGFKRDANLRMHMRAH 164
                     6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MAGTSSLKGN FNSTSDIQIP LFNLSQLHQK MDSLQQFIAE SIDRNSLLGK DEMDMISNEI  60
TSAIHQIIVN GSALISSTQS QTLDGKSPIV PDNFIDQQIF NLSSEKLFEV KKDFTIDEHI  120
DDDENCEIVE LDEVELLGEH VHFCEICGKG FKRDANLRMH MRAHGNQFKT LEALTKQPDK  180
IIIESSDLRK KVRFSCPFVG CSRNKLHKKF RPLKSAVCVK NHFRRSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.25e-45C2H2 family protein