PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383458.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 715aa    MW: 80623.5 Da    PI: 6.0419
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS436.61.8e-1333517141374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfs 94 
                     lv+lLl+cAeav+++d  la++++ +l + ++p gd+mqR+a+yfteAL +rl+  + + +  + +p ++ + ns e l++++++++++P++kf+
  XP_026383458.1 351 LVHLLLACAEAVAKEDYMLAKRYIHHLGQVVTPLGDSMQRVASYFTEALTTRLSAvTLTPTTCTPKPYTAFPPNSFEILKIYQTLYQACPYIKFA 445
                     68****************************************************96444454455555555678********************* PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     h+taNqaI ea+e eervHiiD+di qG QWpa++qaLa+R++g+p lRiTgvgs      e ++etg+ L+++A++l+v+fef++ v +rledl
  XP_026383458.1 446 HFTANQAIIEAFECEERVHIIDLDILQGYQWPAFIQALAARKGGAPFLRITGVGS----PPEFVKETGRCLTELAHSLHVRFEFHP-VGERLEDL 535
                     *******************************************************....89*************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     + ++L+ + gEalaVn+v +lhr+        ++  ++L ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p++s er+k
  XP_026383458.1 536 KSHMLQRRVGEALAVNSVNRLHRVS------GNYLGNLLGMIREQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLHATFPANSPERVK 624
                     ************************8......444557********************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vE+ ++++ei+n+vaceg+er+erhe+lekWr+ ++  GFk+v+ls++a++q klll  ++ dgyr+ e++g+l+lgW+dr+++++SaWr
  XP_026383458.1 625 VEHYIFAPEIRNIVACEGSERVERHERLEKWRKLMKGKGFKEVALSQNAVTQSKLLLGLYSCDGYRLTEDRGCLLLGWQDRAILAASAWR 714
                     *****************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MLNSLCEGIG TVKSENSPCP TNRQPTSSTA SIQEPDQVPG AVSKLEKNST ASLSSLDFQA  60
LRFEDDGDVA GEDVHPSEEN NIWESLFNNF EQIDSISDFM MSSPLRTPEY MISSPRRIII  120
PPQSCGSNNE INYDYLQRLE MQNILSDGCS SSPPYTTTTI QQKGKSSMSP LQRVYNSNTH  180
TKSYNNNHNN SSSSNNNHYL LPESLELPAM EGLEELIDQV HRHNQQYLSA GETFDHHSQH  240
HQMPTTLGTI LETLPLQTDD HNSRFLGGSL NDHEQVGNLQ MNNQQEVNLY DQFSSFERQQ  300
HQLQQMQLQQ QLLQNSQQQQ LHNNVEHGLM APVPGSLPSR SLQEQDSGLQ LVHLLLACAE  360
AVAKEDYMLA KRYIHHLGQV VTPLGDSMQR VASYFTEALT TRLSAVTLTP TTCTPKPYTA  420
FPPNSFEILK IYQTLYQACP YIKFAHFTAN QAIIEAFECE ERVHIIDLDI LQGYQWPAFI  480
QALAARKGGA PFLRITGVGS PPEFVKETGR CLTELAHSLH VRFEFHPVGE RLEDLKSHML  540
QRRVGEALAV NSVNRLHRVS GNYLGNLLGM IREQAPNIVT LVEQEASHNG PYFLGRFLEA  600
LHYYSAIFDS LHATFPANSP ERVKVEHYIF APEIRNIVAC EGSERVERHE RLEKWRKLMK  660
GKGFKEVALS QNAVTQSKLL LGLYSCDGYR LTEDRGCLLL GWQDRAILAA SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-101GRAS family protein