PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383599.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 254aa    MW: 29102.3 Da    PI: 9.5983
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.67e-11117204197
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k ++ps+v+    l++p +  ++h ++ e+++ ++lede+g ++e  +  r+  g+  lt GWk F  +++L+ gD +v++ ++ ++ +++  
  XP_026383599.1 117 FVKSMLPSHVGM---LSVPLEI-RNH-LPRETKVLIVLEDEDGSVYETDY--RGVYGH--LTIGWKTFFMDHKLDNGDALVIEIIEPTRLKYMWE 202
                     788888988885...5789886.355.6677889****************..777776..999********************988788877777 PP

                     EE CS
              B3  96 vf 97 
                     +f
  XP_026383599.1 203 IF 204
                     76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MAQGYSYEEA RKQRLEDNKR RFQELGVLKM ANSLSNVIRK KNKTPVKNQV KTKTTPMNPD  60
FVRHSSRPRK QVTYTERLKN CKTSSIATRV VTYAKRSDAL NRAMSFQSGL LSGNPSFVKS  120
MLPSHVGMLS VPLEIRNHLP RETKVLIVLE DEDGSVYETD YRGVYGHLTI GWKTFFMDHK  180
LDNGDALVIE IIEPTRLKYM WEIFNDNQTC TGTYYLKCPM TSVNIFAYNY NDSLLESGIE  240
SSTSDVKEYV AIIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.16e-24B3 family protein