PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383670.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 892aa    MW: 97974.5 Da    PI: 6.6452
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.91.7e-183693457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_026383670.1 36 YVRYTPEQVEALERVYIECPKPSSLRRQQLVRECpilsNIEPKQIKVWFQNRRCREKQ 93
                    5789****************************************************97 PP
2START159.52.6e-501833902204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++++++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W +++++ e+l v  +g  g+++l+
  XP_026383670.1 183 IAEETLTQFLAKATGTAVDWVQMLGMKPGPDSIGIVAVSHNCSGVAARACGLVSLEPM-KVAEILKDRPSWFRDCRSLEILSVQPTGngGTIELI 276
                     68999*****************************************************.8888888888***************99999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++lv+ Rd++++Ry+  l++g++vi+++S+++ +  +     +++vRae+l Sg+li+p+++g+s +++v+hv+l++++++++lr+l+
  XP_026383670.1 277 YMQTYAPTTLVSaRDYWTLRYTTGLEDGSLVICERSLTPSNGGSGgppAPNFVRAEMLSSGYLIRPCDGGGSMIHIVDHVNLDAWSVPEVLRPLY 371
                     ****************************************99887788*********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s  + ++k++ a+l++ +
  XP_026383670.1 372 ESPKILAQKMTIAALRYIR 390
                     **************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 892 aa     Download sequence    
MALSMYNHHH NNQRELSSTS LKQQQQQQQQ MDTIKYVRYT PEQVEALERV YIECPKPSSL  60
RRQQLVRECP ILSNIEPKQI KVWFQNRRCR EKQRTEASRL QTVNRKLTAM NKLLMEENDR  120
LQKQVSQFVY ENGYMKTQLT NASAVTTDTS CESVVTSGQR QQQQNPTLHP PRDANNPAGL  180
LAIAEETLTQ FLAKATGTAV DWVQMLGMKP GPDSIGIVAV SHNCSGVAAR ACGLVSLEPM  240
KVAEILKDRP SWFRDCRSLE ILSVQPTGNG GTIELIYMQT YAPTTLVSAR DYWTLRYTTG  300
LEDGSLVICE RSLTPSNGGS GGPPAPNFVR AEMLSSGYLI RPCDGGGSMI HIVDHVNLDA  360
WSVPEVLRPL YESPKILAQK MTIAALRYIR QISQEMSGEI RHSGGRQPAV LRTFSQRLCR  420
GFNDAVNGFA DDGWSVLGSD GVEDVTIAIN SSSSKLPCSQ GNSSTMLSIL GGGVVCAKAS  480
MLLKNVPPAL LVRFLREHRS EWADYGVDAY AAASMKSCPY SIPGARPSNF SSNFPSSHVV  540
IPLAHTLENE EALEVVRLES RGFSQDGVLS QDMYLLQLCS GVDENAAGSC AQLVFAPIDE  600
SFPDDAPLLP SGFRVIPLEP KTVGSSPNLF LLIFFSSLSL MFTDAGLMFQ DSRTASRTLD  660
LASTLEAGAG GSRPSSDDNN ELKSVLTIAF QFTYGNHSRD DVIAMARQYV RSIVGSVQRV  720
AMAISPSRLN STLGPKTLAG SPEAVTLARW ISRSYRFHTG MELLLSDPQA SGDSLLKSLW  780
HHSDAIMCCS MKSNASPVFT FANQAGLDLL ETTLVALQDI MLDKVLDETG RKTLCSEFSK  840
IMHQGYSQLP AGICVSSMGR PVSYDQAIAW KVLDDDGTNH CLAFMFMNWS FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein