PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026383799.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 304aa MW: 34461.3 Da PI: 6.5067

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026383799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.8e-17	38	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+llv+++ +G ++W+ a+ g++Rt+k+c++rw++yl XP_026383799.1 38 RGPWTLDEDKLLVHYISFHGDRRWNHLAKSSGLKRTGKSCRLRWLNYL 85 89********************************************97 PP
2	Myb_DNA-binding	48.2	2.5e-15	91	134	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE+ l++++ +lG++ W++Ia++++ gRt++++k++w++ XP_026383799.1 91 RGNLTIEEQILIIQLQSKLGNR-WSRIAKHLP-GRTDNEIKNYWRT 134 788999**************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MAANFSTSAV SSNVNFHEDE EEEENENGVL IHEDELRRGP WTLDEDKLLV HYISFHGDRR 60 WNHLAKSSGL KRTGKSCRLR WLNYLKPDVK RGNLTIEEQI LIIQLQSKLG NRWSRIAKHL 120 PGRTDNEIKN YWRTRVQKQE RQRLKFDPNN MPALFPEDHS MGCFAPRTTI GIMGDQNCRT 180 AHGGQALISD TANCSSSTSS LVPNSTISIS TAFVDTSKHH NSQTASNSTY TTSTSISAAG 240 YDINDYSFPK ALDSNYQMIN DCGNIYDYMD ALINLGNSIS DRCHITEDNT VLDDQMAVHG 300 LWKW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	3e-52	MYB family protein