PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026383964.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 166aa    MW: 18257.5 Da    PI: 5.2257
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026383964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26075.88e-24239330100
          DUF260  30 fanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                     + +++++FGasn++kll++++ ++reda++sl+yeAear++dPvyG++gvi+ lq+q+++l++el++++++
  XP_026383964.1  23 TFMTRRIFGASNITKLLNEISIHQREDAVNSLAYEAEARINDPVYGCIGVISILQNQVRSLREELDVANAN 93 
                     55789************************************************************998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MSHRGFSLDI VLAVYNNVRC GNTFMTRRIF GASNITKLLN EISIHQREDA VNSLAYEAEA  60
RINDPVYGCI GVISILQNQV RSLREELDVA NANLIRLACN GISTSGYALS TSSSVEFNRR  120
IVSIEEEGST SHFIDGRSSC GSELPSLPPP WPEIVKFSGN MNGENF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.12e-32LBD family protein