PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026384076.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 297aa MW: 33845 Da PI: 6.116

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026384076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	50.6	5.3e-16	100	195	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskki 95 ++rl s eDei++L+Gl ++ +++g p ++f ++vk+s++f+ v+ksq+v + +LKk+f k +k +++ +p+f+ ++d k + + k i XP_026384076.1 100 ISRLISVEDEIAILKGLREW-KRKGWFPLLAGQEFTDYVKDSLHFNpVNKSQVVRQVWQLKKRFCKFLEKkNDDDADPVFEDPNDYKLYLIMKDI 193 5799**************.678999*************9659************9988874678899**************** PP DUF573 96 Wg 97 Wg XP_026384076.1 194 WG 195 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MNHPSSCPED RPGASSSAEE ENSKSEASEG EAEKVEISGS EASEGEGESE DDSDDSNFVE 60 SLESHKRKRT KAANKPTSSS SSKAKSSSNI VEKRRKRTPI SRLISVEDEI AILKGLREWK 120 RKGWFPLLAG QEFTDYVKDS LHFNPVNKSQ VVRQVWQLKK RFCKFLEKKN DDDADPVFED 180 PNDYKLYLIM KDIWGDEYPV IRKKNVKYDD DDDNLGRNGN GREVKAKREL LDKLPVLGIT 240 DCISEEGLKL IGDAKVKKFE KKWKKLHQEE LHLNLKRTEL MEEMTQALLA AVKALKD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	122	KRRKRTPISRLISVEDEIAILKGLREWKRK
2	94	123	KRRKRTPISRLISVEDEIAILKGLREWKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00270.1	3e-07	GeBP family protein