PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026384224.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 126aa    MW: 14232.5 Da    PI: 4.3702
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026384224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.86.1e-231060151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+ rqvtfskR+ g++KKA+ +SvL daeva i fs++g+l+ey++
  XP_026384224.1 10 KRIENKIDRQVTFSKRKPGLIKKANKISVLHDAEVAPIFFSPKGELFEYPT 60
                    79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MGKRGRVQLK RIENKIDRQV TFSKRKPGLI KKANKISVLH DAEVAPIFFS PKGELFEYPT  60
DACYLLVIIH SRVAHSSDTD EDLPEESKDD EDSSSGDSET SPASSGSSCS ERYEEDEEDW  120
SYNEED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.14e-28MIKC_MADS family protein