PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026384229.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 222aa    MW: 25069.5 Da    PI: 9.775
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026384229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.34.8e-141150342
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    i +   r  tf kRrng+lKK + LS+LCd+ ++ +++++
  XP_026384229.1 11 IADANIRRATFRKRRNGLLKKVSQLSTLCDVSACAVVYGP 50
                    566777999*****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MTRKKIKLAY IADANIRRAT FRKRRNGLLK KVSQLSTLCD VSACAVVYGP YEPQPEIWPA  60
KPEAHRVLTR FKNLPKMLGN TEKQLNRESY ARNRIDKINE QWKNYQRENR YIEINWIYNH  120
ALAGECSIPD AYPDSVDFSW FLGEKQKEIQ RKLANLDNAP APVVRTIPAA NATAIFATSN  180
GRYANTIAIP SNPNNNFINT DVDVLEINGS GINDGAVTGG DM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKIKLAYIADANIRRATFRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.13e-29M-type_MADS family protein