PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026384284.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 187aa    MW: 21206.6 Da    PI: 5.4091
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026384284.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26067.14e-219111195
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqp...kkfanvhklFGasnvlkllkal.....peeeredamsslvyeAearardPvyGavgvilklqqql 87 
                     +C++Ck+++ +C++ C++apyfp ++p   ++fanv++ +G++n  +l+ ++     ++ +r++a+++l  eA+ r +dPv G ++++++l+ ql
  XP_026384284.1   9 KCSVCKHKGISCPPYCFYAPYFPPDSPtadQEFANVNRYYGTNNFKSLIIRAggieyDPVRRKNAADTLKSEANLRRHDPVLGITAIVKSLEDQL 103
                     5*********************998866779***************999877677778999********************************** PP

          DUF260  88 eqlkaela 95 
                     + ++  l+
  XP_026384284.1 104 SDAEGRLK 111
                     99876665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MWNNQERPKC SVCKHKGISC PPYCFYAPYF PPDSPTADQE FANVNRYYGT NNFKSLIIRA  60
GGIEYDPVRR KNAADTLKSE ANLRRHDPVL GITAIVKSLE DQLSDAEGRL KIAIATNNRW  120
RDTVLANQWE KAYDTNPSEF GFVKEPELSD EQIEKFVESV IQEPDLKRQR VDETGEFSGS  180
AADGRKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30340.11e-07LBD family protein