PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026384909.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 213aa    MW: 23248.4 Da    PI: 6.9692
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026384909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.81.2e-40401391100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+l+rkC+++Cv+apyf +++ +kf  vhk+FGasnv+k+l ++p e+red+++slvyeAear+rdPvyG+vg +  lq+q+ qlk++la
  XP_026384909.1  40 SCAACKYLKRKCTPNCVFAPYFKSDELHKFVKVHKVFGASNVSKILGEVPAEQREDTANSLVYEAEARLRDPVYGCVGALALLQNQMIQLKQDLA 134
                     6*********************************************************************************************9 PP

          DUF260  96 llkee 100
                       +++
  XP_026384909.1 135 ISRAH 139
                     98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MQTFRVYKGY IEHGSGEECI LQKSISMKKG QDCPARPAPS CAACKYLKRK CTPNCVFAPY  60
FKSDELHKFV KVHKVFGASN VSKILGEVPA EQREDTANSL VYEAEARLRD PVYGCVGALA  120
LLQNQMIQLK QDLAISRAHL TCYASDTPPL QPPPPPPPSP IISSDYFVDG LLSSDEFAVY  180
DPVSAGSTSN PNYSDCQPHP YSGATPLSAS FPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.13e-47LBD family protein