PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385470.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 1021aa MW: 114293 Da PI: 5.3021

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	171.5	1.2e-53	15	131	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ++e k+rwlk+ e++ iL+n+e+ +lt++++++p+sgsl+L+n++++r+fr+DGy w+kkkdg+tv E+he+LKvg++e+l+cyYah+e+np fq XP_026385470.1 15 VQEaKRRWLKPVEVLFILQNHENRQLTESAPQKPPSGSLFLFNKRVLRFFRRDGYDWRKKKDGRTVGEAHERLKVGNTEALNCYYAHGEQNPCFQ 109 667699*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rr+yw+L+ ++e+ivlvhy+ev XP_026385470.1 110 RRSYWMLDPAYEHIVLVHYREV 131 ******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1021 aa Download sequence
MMQTPPLGFN INELVQEAKR RWLKPVEVLF ILQNHENRQL TESAPQKPPS GSLFLFNKRV 60 LRFFRRDGYD WRKKKDGRTV GEAHERLKVG NTEALNCYYA HGEQNPCFQR RSYWMLDPAY 120 EHIVLVHYRE VSEGRYSAAS SSHLSPGSST IIQERTLYTS IPGSGSAVTE SHEPYQSSFS 180 PLSMEVSSVL AVQNNGVDHL DGDDEFTEVS RSSNAEVGQA LRRLEEQLSL NDNDIEEIPP 240 YHRQNGQSED LGGSYSETRP YHDNLEDSEI VNNHQYYGEG SGMLDDSEDS LFIQASDENG 300 KQLHKKNLPG NRIERKDSPF WKEMLELCSG SALIESRDRS LSSLDGSEKL VSTEMENISS 360 FPAPTSQWID LTGDDTENGI NCLPSSEDSI QISAARQFLL GSDDPVSPAS VSVAQEVENS 420 EVSTGLTGLN IYKPNPDSYN MWNDQGSQPR NIYSAESSRN TAQQKKFIIR EISPGWGYAT 480 EDTKVFIIGL FLSDPSESAW HCMFGDIETP ARIIQEGVLC CHAPPNISGK VPLYVTSGNR 540 ECCSEIREFE YIVRPRDSTR STEELLLLVR FAQMLLFDPV AVKEDTVAWG IDAAKKTKVD 600 EDHWEYMIEA LLLDSETSSG TVDWLLQKIL KDKLEKWLAS KHQEGDTPNC SLSKREQGVI 660 HMAGALGFGW ALSPILQSGI NINFRDVNGW TALHWAARFG REKMIAALIA AGASAEAVTD 720 PTSHDLVGKT AGSIAAASGH KGLAGYLSEV ALTSHLSSLT IEESELSKGS AVAEAERTVE 780 SISGGRLGET EDQVYLKDYL SAVRNATQAA ARIQSAFRAH SFKRRQQKEV ASASDDEYGL 840 TPEYIAGLSA ASKIAFRGRD HNFDKAALSI QKKYRGWKGR KDFLALRQKV VRIQAHVRGH 900 QVRKKFKMFV WAVGFVDKVV LRWRRKGAGL HKPESESIDE TDEEDILKVF RKQKVDVAIE 960 EAVSQVMSMV ESSKARQQYR RMLEGYRQAK AEFDERASEM ASTSLGDDDM DKDISDFYQF 1020 H

Sequence ? help Back to Top

Protein Sequence Length: 1021 aa Download sequence

MMQTPPLGFN INELVQEAKR RWLKPVEVLF ILQNHENRQL TESAPQKPPS GSLFLFNKRV  60
LRFFRRDGYD WRKKKDGRTV GEAHERLKVG NTEALNCYYA HGEQNPCFQR RSYWMLDPAY  120
EHIVLVHYRE VSEGRYSAAS SSHLSPGSST IIQERTLYTS IPGSGSAVTE SHEPYQSSFS  180
PLSMEVSSVL AVQNNGVDHL DGDDEFTEVS RSSNAEVGQA LRRLEEQLSL NDNDIEEIPP  240
YHRQNGQSED LGGSYSETRP YHDNLEDSEI VNNHQYYGEG SGMLDDSEDS LFIQASDENG  300
KQLHKKNLPG NRIERKDSPF WKEMLELCSG SALIESRDRS LSSLDGSEKL VSTEMENISS  360
FPAPTSQWID LTGDDTENGI NCLPSSEDSI QISAARQFLL GSDDPVSPAS VSVAQEVENS  420
EVSTGLTGLN IYKPNPDSYN MWNDQGSQPR NIYSAESSRN TAQQKKFIIR EISPGWGYAT  480
EDTKVFIIGL FLSDPSESAW HCMFGDIETP ARIIQEGVLC CHAPPNISGK VPLYVTSGNR  540
ECCSEIREFE YIVRPRDSTR STEELLLLVR FAQMLLFDPV AVKEDTVAWG IDAAKKTKVD  600
EDHWEYMIEA LLLDSETSSG TVDWLLQKIL KDKLEKWLAS KHQEGDTPNC SLSKREQGVI  660
HMAGALGFGW ALSPILQSGI NINFRDVNGW TALHWAARFG REKMIAALIA AGASAEAVTD  720
PTSHDLVGKT AGSIAAASGH KGLAGYLSEV ALTSHLSSLT IEESELSKGS AVAEAERTVE  780
SISGGRLGET EDQVYLKDYL SAVRNATQAA ARIQSAFRAH SFKRRQQKEV ASASDDEYGL  840
TPEYIAGLSA ASKIAFRGRD HNFDKAALSI QKKYRGWKGR KDFLALRQKV VRIQAHVRGH  900
QVRKKFKMFV WAVGFVDKVV LRWRRKGAGL HKPESESIDE TDEEDILKVF RKQKVDVAIE  960
EAVSQVMSMV ESSKARQQYR RMLEGYRQAK AEFDERASEM ASTSLGDDDM DKDISDFYQF  1020
H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-168	CAMTA family protein