PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385486.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NF-YC

Protein Properties

Length: 228aa MW: 25630.8 Da PI: 4.6625

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	178.7	5.6e-56	34	138	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdfl XP_026385486.1 34 QLQMFWTYQrqeIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFL 128 89***998899****************************************************************************** PP NF-YC 93 vdivprdelk 102 vdivpr+e+k XP_026385486.1 129 VDIVPREEMK 138 ****9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MESNTNSSNS QQGQPSPFPP QAPFHHLLQQ QQQQLQMFWT YQRQEIEQVN DFKNHQLPLA 60 RIKKIMKADE DVRMISAEAP ILFAKACELF ILELTIRSWL HAEENKRRTL QKNDIAAAIT 120 RTDIFDFLVD IVPREEMKEE AGLGLMGGAT ASGVPYYYPP VGQTAPGVMM GRPAMPGMDP 180 NMYVHQPSQA WQSVWQSDEG PYGNIGGTTG QAANMDEQGY VDQQTSDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	113	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	1e-96	NF-YC family protein