PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385960.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 406aa MW: 44646.9 Da PI: 9.0223

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.5	1.1e-39	110	185	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C v+gC+adls +++yhrrhkvCe+hsk+p vl++g+eqrfCqqCsrfh+l efD++krsCr+rL++hn+rrrk + XP_026385960.1 110 CLVDGCTADLSLCRDYHRRHKVCEAHSKTPIVLINGQEQRFCQQCSRFHSLLEFDDGKRSCRKRLDGHNRRRRKCH 185 *************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MILFNEQILL ILVCFLKTPI SSFVVKKPGF MDWVFKPTSR NKDSSNVPIV RSSSIRGKQN 60 STTTTTGDYS VDLNHQWQDP RVTIASSSSS TLPSKKARTP PSNETQIPSC LVDGCTADLS 120 LCRDYHRRHK VCEAHSKTPI VLINGQEQRF CQQCSRFHSL LEFDDGKRSC RKRLDGHNRR 180 RRKCHTEPLN SGSIFSDNQG NSYLQFSNPQ LFQSATAGSS RHTMTAKDDT DLCGRGQYGD 240 GQNQIARSFS CNFNGGKQYP FFHGEDSALV NHVGIPTIPF SQPHNTGATY SQSSKAGKKV 300 LFSDGFNDRV VLDSNSASSL LSSPPTQPLS RQSSGFGQAD IVHTNTIPPM PHPLAGGSLQ 360 LDGLLGFGRY QSQGLEGEPP SLNSSRGIFH LGLDGSMEHG AFSWKQ

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MILFNEQILL ILVCFLKTPI SSFVVKKPGF MDWVFKPTSR NKDSSNVPIV RSSSIRGKQN  60
STTTTTGDYS VDLNHQWQDP RVTIASSSSS TLPSKKARTP PSNETQIPSC LVDGCTADLS  120
LCRDYHRRHK VCEAHSKTPI VLINGQEQRF CQQCSRFHSL LEFDDGKRSC RKRLDGHNRR  180
RRKCHTEPLN SGSIFSDNQG NSYLQFSNPQ LFQSATAGSS RHTMTAKDDT DLCGRGQYGD  240
GQNQIARSFS CNFNGGKQYP FFHGEDSALV NHVGIPTIPF SQPHNTGATY SQSSKAGKKV  300
LFSDGFNDRV VLDSNSASSL LSSPPTQPLS RQSSGFGQAD IVHTNTIPPM PHPLAGGSLQ  360
LDGLLGFGRY QSQGLEGEPP SLNSSRGIFH LGLDGSMEHG AFSWKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	4e-43	SBP family protein