PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026385964.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 194aa    MW: 22229.6 Da    PI: 10.6047
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026385964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.81.1e-26959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++ rqvtfskRrng+lKKA+ELS+LC+aeva+++fs++gk + ++s
  XP_026385964.1  9 KRIENTTSRQVTFSKRRNGLLKKAFELSILCEAEVALVVFSPSGKAFQFAS 59
                    79*******************************************999985 PP
2K-box77.43.7e-26811756100
           K-box   6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     + s+ +++ae +++e++ +kk  ++L+  ++h+ GedL  L++k+L+qLe+q++++++++Rs+K +ll e+i+ l++k+k+lq+en +L+k+l+e
  XP_026385964.1  81 SCSQRSRTAEFWRTEIDEMKKLADMLEARNKHICGEDLPLLDMKDLKQLERQIKTGVERVRSRKRRLLAEHINMLKRKQKALQDENACLQKRLNE 175
                     444678889******************999************************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MGRGKVELKR IENTTSRQVT FSKRRNGLLK KAFELSILCE AEVALVVFSP SGKAFQFASH  60
DSIDRTIARY RSVAGLPESS SCSQRSRTAE FWRTEIDEMK KLADMLEARN KHICGEDLPL  120
LDMKDLKQLE RQIKTGVERV RSRKRRLLAE HINMLKRKQK ALQDENACLQ KRLNEINVSS  180
RTSKEGDRCS STTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26310.14e-49MIKC_MADS family protein